Shinella sumterensis: Q9314_15430
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Entry
Q9314_15430 CDS
T09417
Name
(GenBank) efflux RND transporter permease subunit
KO
K21134
multidrug efflux pump
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_15430
Transporters [BR:
ssum02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Q9314_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WLS07558
LinkDB
All DBs
Position
3093094..3096183
Genome browser
AA seq
1029 aa
AA seq
DB search
MKKFNLSDWALDHASLVWYFMIVFALLGFFTYQNLGREEDPSFVIKTMTVSAAWPGASVE
ETTRQVTERIERKLEELESLDFTRSVTTPGQTLVFVNLKPTTRARDVAPTWQTVRNMIND
IRGEFPSGVVGPAFNDRFGDVFGNIYAFTADGLTQRQLRDYVEDARRRVLTVPNIGKVDL
IGAQDEVIYLEFSTRQLAALGISTQQVVSTLQAQNAIAPSGVVQGGGERVSVRVGGQFSS
EDSLREVNLRVNNRFFRLSDIATITRGYEDPPSALFRFNGQPAIGLAIGMKQGSNLLEFG
AAVEKKIETLSEELPVGVDVHLVSDQPKVVEEAVSGFTRALFEAVAIVLIVSFVSLGLRA
GLVVALSIPLTLGITFVFMYYDGISLQRVSLGALIIALGLLVDDAMIAVEMMVARLEAGD
TLRKAATYVYTSTAFPMLTGTLVTVAGFIPIGLNNSAAGEFTFSLFVVIAISLVVSWVVA
VVFTPLLGVTILPKSMKQHHDQKGWFGRIFARILDVCMRWKWTTIVATIAVFAVSVFGMG
FVQQQFFPSSDRPELVIDWALPQNASIAETNAQIAKLEEEKLKGNPDIERWSSYVGEGAV
RFLLSFDVQPPSPAFGQTVIVTKDLEARDRVKADLDAYLRTTFVGTDALVKLLDIGPPVG
RPVQYRVSGPDIQEVRKQALAFGEILGRNDRLGDIVYDWNEPARVVKVDVLQDKARQLGV
TSQDIASALNGVVGGTTVTQIRDDTYLIDVIGRAKAGERQSIETLRQLQLPTANGTSVPL
AAVANFRYEMEQPVVWRRSRQPTITVKASVTGGVQPATIVSQMEKQVDAFRAELPSGYDI
AVGGAVEESANSQAPIVAVVPLMLFAMATILMLQLQSFSRLFLVFAVAPLALIGVVIALL
GSGAPLGFVAILGVLALIGILIRNSVILVVQIEHLRLEGKHAWDAVREATEHRMRPIMLT
AAAASLALIPISREVFWGPMAYAMMGGIIVGTVLTLLFLPALYIAWFRIKPEDKDEATPG
PEPEPVTAA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacctttcggactgggcgctcgatcatgcgtcgcttgtctggtatttc
atgatcgtcttcgcgctgctcggcttcttcacctaccagaatctcgggcgtgaggaggat
ccgtccttcgtcatcaagaccatgacggtcagtgccgcctggcccggcgcctccgtcgag
gagacgacacggcaggtgacggagcgcatcgagcgcaagctcgaggagctggaatcgctc
gatttcacacgcagcgtgacgacgcccggacagacgctggtcttcgtcaacctgaagccg
acgacgcgcgcccgcgacgtggcgccgacgtggcagaccgtccgcaacatgatcaacgat
atcaggggggaatttccctccggtgtcgtcggtcccgccttcaacgaccgcttcggcgat
gtgttcggcaatatctatgcctttaccgccgacggcctgacccagcgccagctgcgcgat
tatgtcgaggatgcccgcaggcgcgtgctgacggtgccgaatatcggcaaggtcgatctc
atcggcgcgcaggacgaggtcatctatctcgaattctccacacgccagcttgccgcgctc
ggcatctccacccagcaggtcgtctcgacgctgcaggcgcagaacgcaatcgcaccatcc
ggcgtggtgcagggcggcggggaacgtgtcagcgtgcgcgtcggcgggcagttcagctcg
gaggacagcctccgcgaggtcaatctgcgcgtcaataaccgcttcttccggctgagcgac
atcgccaccatcacgcggggttacgaagacccgccgtcggcattgttccggttcaacggc
cagccggcgatcggtctggcgatcggcatgaagcagggctcgaacctgctggaattcggc
gcggcggtcgagaaaaagatcgagacgctgtctgaggagctgcccgtcggcgtcgacgtg
catctcgtctccgaccagccgaaggtcgtcgaggaagcggtgtcgggcttcacgcgtgcg
ctgttcgaggcggtggccatcgtcctcatcgtcagtttcgtgagcctcggcctgcgggcg
ggcctcgtcgtggcgctctccataccgctgacgctcggcatcaccttcgtcttcatgtat
tatgacggcatatcgctccagcgcgtttcgctcggcgcactcatcatcgcgctcgggctt
ctcgtcgacgatgccatgatcgcggtcgagatgatggtggcccggctggaggcgggggat
acgctgcgcaaggcggcgacctatgtctatacatccaccgccttcccgatgctaacaggc
acgctggtgaccgtggcgggcttcatcccgattggcctcaacaacagtgctgccggcgaa
ttcaccttctcgctgttcgtcgtcatcgcgatctcgcttgtcgtgtcatgggtcgtggcg
gtcgtgttcacgccgctgctcggcgtgacgatcctgcccaagagcatgaagcagcatcac
gaccagaagggctggttcggacgcatcttcgcccgtatcctcgatgtctgcatgcgctgg
aaatggaccacgatcgtcgcgaccatcgcggtcttcgccgtctccgtcttcggcatgggc
ttcgtgcagcaacagttcttcccgtcgtccgaccgcccggaactcgtcatcgactgggcg
ctgccgcagaacgcctcgattgccgaaacgaacgcacagatcgccaagctcgaagaggag
aagctcaagggcaatcccgatatcgagcgctggtcttcctatgtgggcgagggcgcggtg
cgcttcctgctgtcctttgacgtgcagcccccgtcaccggccttcggccagacggtcatc
gtcaccaaggacctcgaagcgcgcgacagggtcaaggcggatctcgatgcctatctgcgc
acgacctttgtcggcacggatgcgctcgtgaagctgctcgacatcggcccgccggtcggc
cgtccggtccagtaccgtgtcagcggtcccgacatccaggaagtgcgcaagcaggcgctg
gccttcggcgagattctcggccgcaacgaccggctgggcgatatcgtctatgactggaac
gagcccgcccgcgtcgtgaaggtcgatgtcctccaggacaaggcccgccagctcggcgtg
acctcacaggatatcgcgtctgcgctcaacggcgtcgtcggcggcaccacggttacgcag
atccgcgacgacacctacctgatcgacgtcatcggccgggcgaaggccggcgagcgccag
tccatcgagacgctgcgccagttgcagctgccgacggccaacggaacctccgtgccgctc
gccgccgttgccaacttccgctacgagatggagcagccggtagtgtggcgccgctctcgc
cagcccaccatcacggtcaaggccagcgtgaccggcggcgtgcagcctgccaccatcgtc
tcccagatggaaaagcaggtcgatgccttccgcgccgagctgccctccggctatgacatc
gccgtcggtggtgccgttgaagaaagcgccaacagccaggcccccatcgttgccgtcgtc
ccgctcatgctctttgccatggcgacgatcctgatgctgcagttgcagagcttctcgcgg
ctgttcctggtcttcgcggtggcgccgctggcgcttatcggcgtggtcatcgcgctgctc
ggcagcggggcgcctctcggcttcgtcgccatcctcggcgtgctggcgctgatcggcatc
cttatccgcaactcggtgatcctcgtggtgcagatcgagcatctgcggctggagggcaaa
catgcctgggacgcggtgcgggaggcgacggaacaccgcatgcgtccgatcatgctgacg
gcggcggccgccagtcttgcgctcattccgatctcgcgggaggtgttctgggggccgatg
gcttacgccatgatgggcggcattatcgtcggtacggtgctgacgctgctcttcctgccg
gcgctttatatcgcctggttccgcatcaagccggaagacaaggacgaggcgacgccgggg
ccggagcccgaacccgtcaccgccgcctga
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