Shinella sumterensis: Q9314_16080
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Entry
Q9314_16080 CDS
T09417
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssum03009
]
Q9314_16080 (der)
Ribosome biogenesis [BR:
ssum03009
]
Prokaryotic type
GTPases
Q9314_16080 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
Ras
AIG1
Roc
RsgA_GTPase
Arf
AAA_24
ABC_tran
AAA_22
TniB
Septin
SRPRB
Motif
Other DBs
NCBI-ProteinID:
WLS07681
LinkDB
All DBs
Position
3225333..3226766
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AA seq
477 aa
AA seq
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MSFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDARLIDLKFRIVDTAGL
EEAAPDTLQGRMRAQTEAAIDEADLSLFVVDAKMGLTPVDQALAEMLRKKGKPVVLVANK
SEARGSDGGFYDAFTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEERAYPEDDEAVTNID
LRAEAAEQGIERDDDYEPEYDETKPLRVAIVGRPNAGKSTLINRFLGEDRLLTGPEAGIT
RDSISVDWSWNGRTIKMFDTAGMRRKARVQEKLEKLSVADGLRAIRFAETVVIVFDSTIP
FEKQDLQIVDLVLREGRAAVLAFNKWDLIDDPQAVLADLREKTDRLLPQARGIRAVPVSG
QTGRGLDKLMQAVIDTDRTWNRRISTAKLNRWLDAQQTQHPPPAVSGRRLKLKYMTQVKA
RPPGFMISCTRPDAVPESYIRYLTNGLRNDFNMPGVPIRIHFRATDNPYASKAKKKR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaccgtcgccattgtcggacgcccgaatgtcggcaagtccaccctgttcaac
aggctcgtgggcaagaagcttgcgctggtcgatgacacgcccggcgtgacgcgtgaccgc
cgcccgggcgatgcgcgcctcatcgacctgaaattccgcatcgtcgacacggcgggcctc
gaagaggccgcgcccgacaccttgcagggccgcatgcgcgcccagacggaagccgccatc
gacgaggccgacctatcgctcttcgtggtggatgccaagatgggcctgacacccgtcgac
caggcgcttgccgaaatgctgcgcaagaagggcaagcccgtcgttctcgtcgccaacaag
tcggaagcccgcggttccgacggcggcttctatgacgccttcacgctcgggctcggcgag
ccgacgccgatttcggccgaacatggccagggcatgctcgacctgcgcgacgccatcgtc
gccgccattggcgaggagcgcgcctatccggaagacgacgaggccgtcaccaatatcgac
ctgcgcgcggaagccgccgagcagggcatcgagcgcgatgacgattacgagccggaatat
gacgagacgaagccgctgcgcgtggccatcgtcggccggccgaatgccggcaagtcgacg
ctgatcaatcgtttcctcggcgaggaccggctgctgaccggcccggaggcgggcatcacg
cgcgattccatctccgtcgactggagctggaacggccgcacgatcaagatgttcgacacg
gccggcatgcggcgcaaggcgcgtgtgcaggagaagctggagaagttgtccgtcgccgat
ggcctgcgcgccatccgcttcgccgagactgtcgtcatcgtcttcgattccaccattccc
ttcgaaaagcaggatctgcagatcgtcgacctcgtattgcgcgagggccgggctgccgtg
ctcgccttcaacaagtgggacctgatcgacgatccgcaggcggtgctggcggatctgcgc
gagaagacggatcggctgttgccgcaggcgcgcggtatccgcgccgttcccgtttccggc
cagaccggccgcggcctcgacaagctgatgcaggccgtgatcgacacggaccgcacctgg
aaccgccgcatctccaccgccaagctcaaccgctggctcgatgcgcagcagacccagcat
ccgccgccggccgtttccggccgccgcctgaagctgaaatacatgacgcaggtgaaggcc
cgcccgccgggcttcatgatctcctgcacgcgtcccgatgccgtgccggaatcctatatc
cgctacctcaccaacggcctgcgcaacgacttcaacatgccgggcgtgccgatccgcatc
cacttcagggcaacggacaatccgtatgcctcgaaggcgaagaagaagcgctga
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