KEGG   Shinella sumterensis: Q9314_16155
Entry
Q9314_16155       CDS       T09417                                 
Symbol
choV
Name
(GenBank) choline ABC transporter ATP-binding protein
  KO
K02000  glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
Organism
ssum  Shinella sumterensis
Pathway
ssum02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Q9314_16155 (choV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssum02000]
    Q9314_16155 (choV)
Enzymes [BR:ssum01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.9  ABC-type quaternary amine transporter
     Q9314_16155 (choV)
Transporters [BR:ssum02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Glycine betaine/proline transporter
    Q9314_16155 (choV)
SSDB
Motif
Pfam: ABC_tran AAA_21 ABC_ATPase CBS AAA_16 SMC_N AAA_33 AAA_29 nSTAND1 RsgA_GTPase AAA_22 AAA_30 BCA_ABC_TP_C NB-ARC
Other DBs
NCBI-ProteinID: WLS07696
LinkDB
Position
complement(3240070..3241110)
AA seq 346 aa
MTDAVVFNNVSIIFGDNPQRALALADAGKSRDEIGAETGLVLGVADATLSINEGEILVLM
GLSGSGKSTLLRAVNGLAPVVRGDVAVKAGTGAVNPYKATPKALRDFRMHTVSMVFQQFA
LLPWRTVADNVGFGLELAGVPDSERKARVAEQLELVNLTKWANRKVNELSGGMQQRVGLA
RAFATGAPILLMDEPFSALDPLIRTRLQDELLEFQHRLKKTIIFVSHDLDEAFRIGNRIA
IMEGGRIIQCGTPQEIVKNPANQYVADFVQNMNPINMLTAHDVMQPGASHSGTVTATTAP
ETPLVDVLDAMARTPGNVGVVENGTVVGTISAQDVIGGLTRHRRRG
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaccgacgctgtcgtcttcaacaacgtatccatcatcttcggcgacaatccgcagaga
gcgctcgctctggccgatgccggcaagtcgcgtgacgagatcggcgccgaaacgggcctc
gtcctcggcgttgccgatgccacgctgtcgatcaacgagggcgaaatcctcgtgctgatg
ggcctgtccggctcgggcaagtcgacgctgctgcgcgccgtcaacgggcttgcacccgtc
gtgcgcggcgatgtggcggtcaaggccggcaccggcgcggtgaacccctacaaggcaacg
cccaaggcgctacgcgatttccgcatgcacaccgtgtccatggtgttccagcagttcgcg
ctcctgccctggcgcaccgtcgccgacaatgtcggcttcggtctggagcttgccggcgtg
ccggacagcgagcgcaaggcgcgggtcgccgagcagctcgaactcgtcaacctcaccaaa
tgggcgaaccgcaaggtcaacgagctctcgggcggcatgcagcagcgtgtcggcctcgcc
cgggcctttgcgacgggcgcgccgatcctgctcatggacgagccgttctccgcgctcgac
ccgctgatccgcacccgcctgcaggacgaactcctggagttccagcaccggctgaagaag
accatcatcttcgtcagccatgacctggacgaggccttccgcatcggcaaccgcatcgcc
atcatggagggcgggcgcatcatccagtgcggcacgccgcaggagatcgtgaagaacccg
gccaaccagtatgtcgcggacttcgtgcagaacatgaacccgatcaacatgctgacggcg
cacgatgtcatgcagcccggcgcctcgcacagcggcaccgtcacggccaccaccgcgccg
gaaacgccgctggtcgacgtgctcgacgccatggcgcgcacgcccggcaatgtcggcgtc
gtcgaaaacggcaccgtcgtcggcacgatcagcgcgcaggacgtcataggcggattgacg
cgccaccgccggcgcggctga

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