Shinella sumterensis: Q9314_16160
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Entry
Q9314_16160 CDS
T09417
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_16160 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_16160 (choW)
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Q9314_16160 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
DUF3464
Motif
Other DBs
NCBI-ProteinID:
WLS07697
LinkDB
All DBs
Position
complement(3241107..3241979)
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AA seq
290 aa
AA seq
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MDWLTVSKIPIGPIAKEAVSWLTTNGKGLFDFLKVFLQAGIDAVLYVLQGPFASAGGKFG
YSIALILLVSAASWYFRRSVGVALFTFLGLLLIVNQGYWKETTETLALVLAATGVSMIVG
VPLGIAAARRPWFYSILRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPI
RLTRLGIISTPPALVEAAQAFGATPGQVLRKVELPFATPQIMAGLTQTIMLSLSMVVIAA
LVGAKGLGVPVVRALNTVNISMGFEAGLCIVILAIILDRLFRAADEGDGK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggattggcttaccgtttccaaaattccgatcggacccatcgccaaagaggccgtcagc
tggctgacgacgaacggcaagggactgtttgatttcctgaaagtcttcctgcaggccggc
atcgatgcggtgctctatgtgctgcagggcccgttcgccagcgccggcggcaaattcggc
tattccattgccctcatcctgctcgtctcggccgcaagctggtatttccgccggtccgtc
ggggtggcgctcttcacctttctcggcctgctgctcatcgtgaaccagggctactggaag
gaaaccacggaaacgctggccctcgtgctggcggcaaccggcgtcagcatgatcgtcggc
gtgccgctcggcatcgcggccgcccgccggccctggttctattccatcctgcggccgatc
ctcgatctcatgcagacgatcccgaccttcgtctacctgatcccggccctcatcctcttc
gggctcggcatggtgcccggcctgatcgcgacggtgatcttcgccatccccgcgccgatc
cgcctcacccgcctcggcatcatctccacgccgcccgcgctggtcgaagctgcacaagcc
ttcggtgcgacaccgggccaggtgctgcgcaaggtcgagctgcccttcgccacgccgcag
atcatggcaggcctcacgcagacgatcatgctgtcgctttccatggtggtcatcgcggcc
ctcgtcggcgccaagggcctcggcgttcccgtggtgcgcgcgctcaataccgtgaacatc
tccatgggtttcgaggcgggcctgtgtatcgtcatcctcgcgatcattctcgatcgcctc
ttccgcgccgctgacgaaggagacggcaaatga
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