Shinella sumterensis: Q9314_16735
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Entry
Q9314_16735 CDS
T09417
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_16735
01504 Antimicrobial resistance genes [BR:
ssum01504
]
Q9314_16735
Transporters [BR:
ssum02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
Q9314_16735
Antimicrobial resistance genes [BR:
ssum01504
]
Gene variants
Tetracycline resistance genes
Transporters
Q9314_16735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_5
TRI12
LacY_symp
MFS_4
FPN1
Motif
Other DBs
NCBI-ProteinID:
WLS07803
LinkDB
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Position
3356230..3357483
Genome browser
AA seq
417 aa
AA seq
DB search
MVDARSTRRGLFLVFMIMFLDVIGIAIVVPVLPTYLHELTGDDISQAAIDGGWLLLVYAG
MQFLFAPLIGNLSDRFGRRPVLLACILTFAIDNLICALATSYWMLFAGRVLAGISGASFS
TAAAFIADVSDDETRAKNFGLMGIAFGTGFVIGPVIGGVLGEFGPRIPFYGAAAIAFLNF
VAACILLPESLAPKNRRRFELARANPLGALLQMRNHPGVLWVGVVLFCYGLAHAVYPAVW
PFVAALRYGWSEGQIGLSLGVFGIGGALVMGFVLPRIVPRIGEYRTAVVGICFSVLGLCG
YAAAWQGWMVYVVIVLTALESLADPPLRSIAAARVPPSAQGELQGALTSISSITTVIGPL
LFTQAFSYFTGPKAPVTFAGAPYALAAAILFIGLIVFITTLRGAGAGPKAKTAPEMA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgccaggtccacccggcgcgggctctttctcgtcttcatgatcatgttcctc
gacgtgatcggcatcgccatcgtcgtgccggtgctgcccacctatctgcacgaactgacc
ggcgacgatatcagccaggcggcgatcgacggcggctggctgctgctcgtctatgccggc
atgcagttcctcttcgcgccgctcatcggcaatctctcggatcgcttcgggcgccggccg
gtcctgctggcctgcatcctgaccttcgccatcgacaacctgatctgcgcgctggcgacg
agctactggatgctgtttgccggccgcgtgctggcgggcatcagcggagcgagcttctcg
acggccgccgccttcatcgccgatgtctccgacgacgagacgcgggcgaagaatttcggc
ctgatgggcatcgcgttcggcaccggcttcgtgatcggccccgtgattggcggcgtgctc
ggggaattcggcccgcgcatccccttctacggcgccgccgcgatcgccttcctcaatttc
gtcgccgcctgcatcctgctgccggaaagcctcgcgccgaagaaccgccgccggttcgaa
ctcgcccgcgccaatccgctcggcgcgctgcttcagatgcgcaaccatcccggcgtgctg
tgggtgggcgtcgtgctgttctgctacgggctggcgcatgccgtctatccagcggtctgg
cccttcgtcgccgccctgcgctacggctggagcgaaggccagatcggcctgtcgctcggc
gtcttcggcatcggcggggcgctggtcatgggcttcgtgctgccgcgcatcgtgccgcgc
atcggcgaataccgcacggcggtcgtcggcatctgcttttccgtcctcggcctttgcggc
tatgccgcagcctggcagggctggatggtctatgtggtgatcgtgctgacggcgctcgaa
agcctcgccgatccgccgctgcgctcgatagcggcggcacgcgttccgccatccgcgcag
ggcgagttgcagggtgcgctcaccagcatatccagcatcaccaccgtcatcggtccgctg
ctcttcacccaggccttcagctacttcaccggcccgaaggcgccggtcacctttgccggc
gcgccctatgcgctggcggcagcgatcctgttcatcgggctcatcgtcttcatcacgacg
ttgcgcggcgcgggtgcgggcccgaaggcgaaaacagcgccggaaatggcctga
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