Shinella sumterensis: Q9314_17000
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Entry
Q9314_17000 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_17000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_17000
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_17000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_22
SMC_N
AAA_16
ABC_ATPase
AAA_29
nSTAND1
AAA_30
nSTAND_NTPase5
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
WLS07855
LinkDB
All DBs
Position
complement(3409121..3410113)
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AA seq
330 aa
AA seq
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MTAVLFQQVSRHFGAVRAVDSVDLAIAEGEFFAMLGPSGSGKTTCLRLMAGFEQPTAGHI
EIFGETAEGVPPYRRNVNTVFQDYALFPHLSILENVAYGLMVKGVGKAERLKAAEDALAM
VKLPGYGTRRPGQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQEELKALQ
KSLGITFVFVTHDQGEALSMADRIAVFNDGKIQQLGTPEEVYKRPATRFVADFVGSSNVL
PPDFVDMLGFGRHHASLRPEAIALGDGPGRKHVSGRVTAASFLGAANRVTVDANGTRIAA
MLPAAVAVPAQGEMVTLSFLPEDLHTMDGA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtcctgttccagcaagtgtcccgccatttcggcgccgtgcgcgccgtcgac
agcgtggacctcgccatcgccgagggggagttcttcgcgatgctcggtccatcaggctcc
ggcaagacgacctgcctgcgcctgatggccgggttcgagcagccgacggcggggcatatc
gagatcttcggcgagacggccgagggcgtgccgccctaccggcgcaacgtcaacacggtg
ttccaggactatgccctcttcccgcatctctcgatcctcgaaaacgtcgcctacgggctg
atggtcaagggtgtcggcaaggccgaacggctgaaggccgccgaagacgcgctcgccatg
gtcaagctgcccggctacggcacgcgccgccccggccagctctccggcggccagcgccag
cgcgtggcgctggcgcgcgcgctggtcaaccgcccccgcgtgctgctcctcgacgaaccg
ctcggcgcgctcgacctcaagctgcgcgagcagatgcaggaagagctgaaggccctgcag
aaatcgctcggcatcaccttcgtcttcgtcacgcacgaccagggcgaggcgctctccatg
gccgaccgcatcgccgtcttcaacgacggaaagatccagcagctcggcacgccggaagag
gtctacaagcgcccggcgacgcgcttcgtcgccgatttcgtcggctcttccaacgtgctg
ccgcccgatttcgtcgacatgctcggcttcggccgccaccatgccagccttcgccccgag
gcgatcgcgctcggcgacggccccggccgcaagcatgtctccggccgcgtgaccgccgca
agcttcctcggcgccgccaaccgcgtgacggtcgacgccaacggcacccgcatcgccgcc
atgctgcccgccgccgtcgcggtgcccgcgcagggcgagatggtcacgctctccttcctg
ccggaagacctgcatacgatggatggcgcgtga
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