Shinella sumterensis: Q9314_17035
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Entry
Q9314_17035 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_17035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_17035
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Q9314_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_29
AAA_16
AAA_22
RsgA_GTPase
AAA_23
nSTAND1
AAA_25
nSTAND3
Zeta_toxin
DUF87
NB-ARC
NACHT
ABC_ATPase
Mg_chelatase
Sigma54_activat
ATP-synt_ab
AAA_15
MTBMA_p00010_2nd
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WLS07862
LinkDB
All DBs
Position
complement(3416048..3417679)
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AA seq
543 aa
AA seq
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MPDLLSVRNLKIEATSYPPGEAPRTVTLVEGVNFDVQKGKVLGLIGESGAGKSTIGLTAL
AYGRGGVRITGGEVKLNGEDLLRLSPSGIRKVRGAKVCYVAQSAAAAFNPAHRLGEQVIE
ASLKHGIMSRAEAEKRALYLFKVLGLPNPETFGQRYPHQVSGGQLQRAMTAMALCPNPEL
IVFDEPTTALDVTTQIDVLAAIKHAIEETNTAALYITHDLAVVAQITDDILVLRHGKMVE
YGSVKDIIEAPKEEYTRALVNVRGTARDEAPDQTNTLLKVENITAGYSNGFKVLQNVSLH
LPKGQTLAVVGESGSGKSTLARVITGLLPPQDGTISFDGTVLPKALKGRTNDQLRRIQMI
YQMADTAMNPRQTVRDIIGRPLTFYYGLRGAKKTERVKELLEQIEMGGRFADRYPAELSG
GQKQRVAIARALAAQPELILCDEPTSALDPLVAEGILKLLLKLQDETHVSYMFITHDIAI
VRAIADSVAVMHRGKLVRFGPKSKVLAPPFDDYTDLLLKSVPEMEIGWLEKVLSTRRMES
AGN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcttctgtccgtccgaaacctcaagatcgaggcgaccagctacccgcccggc
gaagcgccgcggaccgtcacccttgtcgaaggcgtcaacttcgacgtccagaaaggcaag
gtcctcggcctcatcggcgaatccggcgccggcaagtcgaccatcgggctcaccgcgctc
gcctatggccgcggcggggtgcgcatcaccggcggcgaggtcaagctgaacggcgaagac
ctcctcagactctcgccgtcgggcatccgcaaggtgcgcggcgccaaggtctgctacgtc
gcgcaatcggcggccgcggccttcaaccccgcacaccggctcggcgagcaggtcatcgag
gcctcgctgaaacacggcatcatgagccgtgcggaagcggaaaagcgggcgctctacctg
ttcaaggtgctcggcctgccgaacccggaaaccttcggccagcgctatccgcaccaggtc
tccgggggccagctgcagcgcgccatgaccgccatggcgctctgccccaatcccgagctc
atcgtcttcgacgagccgaccaccgcgctggacgtcacgacgcagatcgatgtgctggcc
gccatcaagcacgccatcgaggagaccaacaccgccgccctctacatcacccacgacctt
gccgtcgtcgcccagattacggacgacatcctcgtgctccggcatggcaagatggtggaa
tacggctcggtgaaggacatcatcgaggcgccgaaggaggagtatacccgcgcactcgtc
aatgtgcgcggcaccgcccgcgacgaggcgcccgaccagacgaacacgctgctgaaggtg
gaaaacatcaccgccggctattccaacggcttcaaggtgctgcagaacgtctcgctgcac
ctgccgaagggccagacgctggcggtggtgggtgaatccggttcgggcaagtccacgctc
gcccgcgtcatcaccggcctcctgcccccgcaggacggcacgatcagcttcgacggcacc
gtgctgcccaaggcgctgaagggcaggacgaacgaccagctgcgccgcatccagatgatc
taccagatggccgataccgcgatgaacccgcgccagacggtgcgcgacatcatcggccgc
cccctcaccttctattacggcctgcgcggcgccaagaagaccgagcgggtgaaggaactg
ctggagcagatcgagatgggcggccgcttcgccgaccgctacccggccgaactgtccggc
ggccagaagcagcgcgtcgccatcgcccgcgcacttgccgcacagcccgagctcatcctc
tgcgacgagccgacctcggccctcgacccgctggtggccgagggcatcctgaagctgctg
ttgaagcttcaggacgagacgcatgtctcctacatgttcatcacccacgacatcgcgatc
gttcgcgcgatcgccgacagcgtggccgtcatgcaccggggcaagctcgtgcgcttcggc
ccgaaatcgaaggtgctggcaccgcccttcgacgactataccgaccttctcctcaaatcc
gtccccgaaatggagatcggctggctggaaaaggtgctgtcgacacggcgcatggaaagc
gccggcaactga
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