Shinella sumterensis: Q9314_17170
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Entry
Q9314_17170 CDS
T09417
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q9314_17170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_17170
Transporters [BR:
ssum02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Q9314_17170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
WLS07888
LinkDB
All DBs
Position
3448565..3449887
Genome browser
AA seq
440 aa
AA seq
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MSYEFIAITMFAGMMVLLLTGQRVFAVIGFVGVVAAFLLWGEGGSEMGFSSAMKLVKWYP
MLTVPMFVFMGYMLSESGIAEDMYKAIHVWMGPINGGLALGTVGLMVIISAMNGLSVAGM
AIGATIALPELLRRGYDKVMMTGVVQGGSTLGILLPPSVVLVLYGMIARVPVGQLWLAGL
LPGLMMAALMAIYVYVRCRVNPALGPALPLSERNVPFREKVRLLSAGIVPLGIFVLMMWL
FLSGIASLVESSAVGAICSALVAWWRGRLSARLWNDVLQKTLGITCMFMWILIASLCFGA
VFDGLGAVKSIERFFLGDLGLEPWQVLVLMQLSFLIMGMFLDDTAMLVIVAPLYIPLVQK
LGFDLVWYGVLYTITCQIAYITPPFGYNLFMMRAMAPPEIGMRDIYKSIWPFVGIMVASL
IIIGVFPEIATWLPNNYYSK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgaattcatcgcaatcacgatgttcgccggcatgatggtgctgctgctcacc
gggcagcgcgtcttcgccgtgatcggcttcgtcggcgtcgtggccgccttcctgctgtgg
ggtgagggcggctccgagatgggcttctcgtccgccatgaagctcgtcaaatggtatccg
atgctcacggtgccgatgttcgtgttcatgggctacatgctctcggaatcgggcatcgcc
gaggacatgtacaaggccattcatgtctggatggggccgatcaatggcggtctggcgctc
ggaaccgtcgggctcatggtcatcatctccgccatgaacggcctttccgtcgccggcatg
gcgatcggcgcgaccatcgcgctgccggaactgctgcgtcgcggttatgacaaggtcatg
atgacgggcgtggtgcagggcggctcgacgttgggcatcctgctgccgccaagcgtggtg
ctggtgctctacggcatgatcgcccgtgttccggtcggccagctctggcttgccggcctt
ctgcccggtctgatgatggcggcgctgatggcgatctacgtctatgtgcgctgccgcgtg
aacccggcgctcggtccggcgttgccgctctcggagcgcaatgtgccgttccgcgagaag
gtgcggctgctctcggcgggcatcgtaccgctcggcatattcgtgctcatgatgtggctg
ttcctcagcgggatcgcgagccttgtcgaaagctcggcggtcggcgcgatctgctcggcg
ctcgtcgcctggtggcgcgggcgtctcagcgcccggctgtggaacgacgtgctgcagaag
acgctcggcatcacctgcatgttcatgtggatcctgatcgcttcgctctgcttcggcgcc
gtgttcgacggtctgggcgcggtcaagtcgatcgagcgcttcttcctgggcgacctaggc
ttggagccctggcaggtgctggtgctgatgcagctttcgttcctgatcatggggatgttc
ctcgacgatacggcgatgctcgtcatcgtcgcgccgctctacatcccgctggtgcagaag
ctgggcttcgatctcgtctggtatggcgtgctctacacgatcacctgccagatcgcctac
atcaccccgcccttcggctacaacctgttcatgatgcgggcgatggcgccgcccgagatc
ggcatgcgggacatctacaaatcgatctggccttttgtcggcatcatggtcgctagcctg
atcatcatcggtgtcttccccgagatcgcgacgtggctgccgaacaactattacagcaaa
taa
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