Shinella sumterensis: Q9314_17210
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Entry
Q9314_17210 CDS
T09417
Name
(GenBank) L,D-transpeptidase
Organism
ssum
Shinella sumterensis
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WLS07896
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Position
complement(3459279..3460694)
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AA seq
471 aa
AA seq
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MKSILKSSISLIAAISVLGIATLPAAAQQHQLSRDTVLVSPDGDILDYVPNDGSVRWTRD
NRGRSVLVDSWGEVIATAMPADSYFARGDDYRPRRDRYRPVRGYDETNPEYFPPAPGSDY
GDDVTTGSVPEMREALPGDIERQQLPDADFGGSQAMPEFNGNDDMAALPADPNQEFVPGP
KFAPATALGKMSSNEVTALQVFLDREGFSPGVIDGKKGSNVTKAIEAWQNATGDTLDPNN
TEDILERLRLSGGMAFTTYEITAADAAGPYVASIPEDYAHKAALPHLSFTSTTEMLAEKF
HMDEAYLKEINPGVDFTIPGTIVKVVDIGKPKTGKVAKILADKGRKQVLAYDANGTLIAA
YPASIGSADTPSPSGTVTVERIALNPGYTYNPKINFKQGSNDKVLTLQPGPNGPVGTVWI
ALSKPTYGIHGTPEPSKIGKTQSHGCIRLTNWDATELAKMTSAGVTVEFVD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcgatactgaaatcaagcatttcgcttattgctgcgatctccgtgctcggaatc
gccaccctgcccgccgccgcgcagcagcaccagctttcgcgcgatacggttctcgtttcg
cccgatggcgacattctcgactacgttcccaacgatggcagcgtgcgctggacgcgcgac
aatcgcggccgctcggtgctggtcgattcgtggggcgaggtcatcgccaccgccatgccg
gcggatagctacttcgcccgcggcgacgactatcgcccccgtcgcgaccgttatcgcccg
gtgcgcggctatgacgaaacgaacccggaatactttccgccggcacccggctcggactat
ggcgacgacgtgacgacgggctccgtaccggaaatgcgtgaggcgctgccgggcgacatc
gagcgccagcaattgcccgacgccgatttcggcggctcgcaggccatgcccgaattcaac
ggcaacgacgacatggccgccctgccggccgatccgaaccaggagttcgtgcccggcccg
aaattcgcgcccgccaccgcgcttggcaagatgtcgtccaacgaggtcacggcgctccag
gtcttcctcgaccgcgagggcttctcgcccggcgtcatcgacggcaaaaagggctcgaac
gtcaccaaggccatcgaagcctggcagaacgcgacgggcgacacgctcgacccgaacaat
acagaggacattctggaacgcctgcgcctgtccggcggcatggccttcaccacctacgag
atcaccgccgccgatgcggccggtccctacgtggcgtcgatcccggaagactacgcccac
aaggcggcccttccgcacctgtccttcacctcgaccacggaaatgctggccgagaagttc
catatggacgaggcctatctgaaggagatcaatccgggtgtggatttcaccattcccggc
acgatcgtcaaggtcgtggacatcggcaagccgaagaccggcaaggtggccaagatcctc
gccgacaagggccgcaagcaggtgctggcctatgatgccaatggcacgctgatcgccgcc
tatccggcgagcatcggctcggccgatacgccctcgccgtccggcacggttacggtcgag
cgcatcgcgctcaatccgggctacacctacaatccgaagatcaacttcaagcagggcagc
aacgacaaggtgcttaccctccagcccggcccgaacggcccggtgggaacggtatggatc
gcgctgtccaagccgacctacggcatccacggcacgccggaaccgtcaaagatcggcaag
acccagagccacggctgtatccgcctgaccaactgggacgccaccgagctcgccaagatg
acgagcgccggcgtcacggtcgaattcgtcgactga
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