Shinella sumterensis: Q9314_20120
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Entry
Q9314_20120 CDS
T09417
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_20120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_20120
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_20120
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
DUF4064
MS_channel_1st_1
Glycophorin_A
Motif
Other DBs
NCBI-ProteinID:
WLS11127
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Position
unnamed1:complement(256221..257006)
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AA seq
261 aa
AA seq
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MPSFPRILLGLFCLLVAILLLAPTLVVIPMSFNGNKSLAFPPVGFSWQWYGNFFSSPDWT
TSFSNSLIVAIIVAVVATVIGTLAAFGVSRAAARTGGLLRALLITPMVVPGVVLAIGIYA
VYLDTHLVGTVTGFVLAHTMLAIPFVLIAVQASLEVFDRRLETAASSLGAGRLTVFRTVT
LPLILPGVLSGALFAFITSFDEIIVALFITSPYLKTLPVQIYTSITRDADPTVAAVGTLL
FLATSLIIIAGLLLGMRRERT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccttcccgcgcattcttctcggactcttctgcctgctcgtggcgatcctgctt
cttgcgccgacactggtcgtcatcccgatgtcgttcaacggaaacaagtcactcgccttc
ccgcccgtcggcttcagctggcagtggtacggaaatttcttcagcagcccggattggacg
acgagcttctccaactcgctgatcgtggccatcatcgtggccgtcgtggcgaccgtgatc
ggcacgctcgcggccttcggcgtcagccgcgccgccgcgcgcacgggcggcctgctgcgt
gcattgctcatcacgccgatggtcgtgcccggcgtggtgctggcgatcggcatctatgcg
gtctatctcgatacgcacctcgtcggcaccgtcaccggcttcgtgctcgcacacaccatg
cttgccattcccttcgtgctgatcgccgtgcaggcgagcctcgaggtcttcgaccgccgg
ctggaaacggcggcctcgagcctgggcgccggccgcctgaccgtgttccgcacggtgacg
ctgccgctgatcctgccgggcgtgctatcgggcgcgctcttcgccttcatcacatcgttc
gatgagatcatcgtcgcgctgttcatcaccagcccctatctcaagacgctgccggtgcag
atctatacgtcgataacgcgcgacgctgacccaaccgtcgcggccgtcggcacgctgctc
ttcctcgccacgtcgctcatcatcatcgccggcctcctcttgggcatgcgccgcgaaagg
acctga
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