Shinella sumterensis: Q9314_20455
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Entry
Q9314_20455 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_20455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_20455
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_20455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
TOBE_2
ABC_ATPase
AAA_25
AAA
AAA_16
AAA_30
Rad17
AAA_22
RsgA_GTPase
NB-ARC
nSTAND1
ORC-CDC6-like
ATPase_2
AAA_19
AAA_29
NACHT
AAA_5
nSTAND3
AAA_23
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WLS11188
LinkDB
All DBs
Position
unnamed1:321922..322935
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AA seq
337 aa
AA seq
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MTLLAIQDVSKSFSSHRALDRVSLDVMQGEFISLLGPSGCGKTTLLRVIGGFMSADGGRV
IIDGQDVSSLPPERRPLNTVFQNYALFPHMTVLENVSYGPRRAGASRKEAEVRAHEALEM
VGLAAMAPRSPRAMSGGQQQRVALARAIVNKPKLLLLDEPLSALDLQLRKRMQIELKQLQ
VQLGITFIFVTHDQDEAMAMSDRIAVMSAGRIEQIDEPETIYRRPSTRFVADFIGEANIV
PMQKDGRSLARDAVFDGVLRPENLRVFTRTDSLPDGWLSLPATVSASTYVGGTSNIYMVS
GDRSLHARSYGVLPGDIREGVEIIAGFDPADIHILEG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcttgccatccaagacgtctcgaagtccttctcaagccaccgagcgctcgat
cgcgtgtcgctggatgtcatgcagggcgagttcatttctctgctcggtccgtccggctgc
ggcaagacgacacttctgcgcgtcattggcggcttcatgtcggccgacggtgggcgcgtc
atcatcgatgggcaggatgtgtcgtcgttgccgccggaacggcggccactcaacacggtt
ttccagaactatgcgctgttcccgcacatgacggttctggagaatgtctcgtatggaccg
cggcgtgccggcgcttctcgcaaggaagcggaagtgcgggcgcatgaggcgctggaaatg
gttggcctggccgcgatggcaccgcgcagcccgcgtgcgatgtcgggcggtcagcagcaa
cgcgttgcgctcgcccgcgccatcgtcaacaagcccaagctgctgctgcttgacgagccg
ctgtcggcactggacctgcaactgcgcaaacggatgcagatcgaactcaaacagctgcag
gtccagctcggcatcacattcatcttcgtgacacacgatcaggatgaggcgatggccatg
tccgaccgcatcgcagtgatgtcggccggccgtatcgaacagatcgacgagcccgagacc
atataccgtcggccgagcacccgtttcgtcgccgattttatcggtgaggcgaacatcgtg
ccaatgcagaaggacgggcgttcgctcgcgcgcgacgccgttttcgatggcgtattgcgc
ccggagaaccttcgtgtctttacgcgcaccgacagcctgccggacggctggctttcgctt
ccggcgaccgtttcggcgagcacatatgttggcggcacctccaacatctacatggtctcc
ggcgaccggtcgttgcatgcgcgcagctacggcgtcctgcccggcgatatccgcgaaggc
gtcgagatcatcgcgggattcgatccggccgacatccatatcctggaagggtag
DBGET
integrated database retrieval system
