Shinella sumterensis: Q9314_20540
Help
Entry
Q9314_20540 CDS
T09417
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_20540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_20540
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_20540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
WLS11205
LinkDB
All DBs
Position
unnamed1:340035..341186
Genome browser
AA seq
383 aa
AA seq
DB search
MFDTKLTRRSVLVAGATTALAMPFVRPSWAAPATVRALMWEAYLLPDQITAFEEANKVKF
VPSFFDGNSEAYNKLRVGGSKEFDLVQADGFWPQLYFREGLLRAVDYSKVPNASGYLPEF
EAEAFKVLSDPQSGKKIGFPFCWGAYGITYDAGKVPPERTETLECMFSSDYSGMLSTSAR
FEENIALAALLVTDRLGSRDKPRPDGKPFNPYVLSDEELAEVEKLLIQQKSLLLTRYQDN
PTLFQLLQSGAVVAATEFAQVFRQLLTAEAQGAAPVDFRHALKMKEGGLGWVDTWLVTSG
VQDGAKFDLCNSFIDLMISPAVMKKIGEVAGCSTTVDLRSISNETERKLFLMDRSNEIAD
LFMFDQPSSPEKWERVWSNVQAA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaccaagcttacgcgcagaagcgttcttgtcgccggcgctacaacagcgctc
gctatgccttttgtgcgcccgtcctgggcggccccggctacggttcgtgcgttgatgtgg
gaagcctatctgcttcccgaccagatcacggccttcgaggaggcaaacaaggtcaagttc
gtcccgtccttcttcgacggcaattccgaagcctacaacaagcttcgcgttggcggttcg
aaggaattcgaccttgtgcaggccgacggattttggccgcaactgtatttccgtgagggg
ctgttgcgggcggtggactattccaaggtcccgaacgcctccggttatctgccggaattt
gaagccgaagcgttcaaggtcctttccgatccccaatccggcaagaagatcggcttcccg
ttctgctggggcgcgtacggtatcacctatgatgccggcaaggtcccgccggaacgaacc
gagacgctcgaatgcatgttcagttccgactactcgggcatgctgtcgaccagcgcgcgc
ttcgaggagaacatcgcgcttgcggcactcctggttacggatcgcctcggcagccgggac
aagccgcgtccggacggaaagccgttcaatccgtatgtcctgtccgatgaagagcttgcg
gaggtcgagaagcttctgatccagcagaagagcctgcttctcacccgctaccaggacaat
ccgacgctgttccagcttctgcaaagcggcgcagtcgtcgccgcgaccgagttcgcacag
gtcttccggcagttgctgacggccgaagcgcaaggcgccgcgccagtcgatttccggcat
gcgctgaagatgaaggaaggcggtctcggctgggttgatacctggctggtgacctcgggc
gtgcaggacggtgcgaagttcgatctctgcaatagcttcatcgatctcatgatctcacct
gcggtcatgaagaagatcggcgaggtggcgggctgctcgacgacagtcgatctgcgttcg
atctcgaatgaaaccgagcgaaaactgttcctgatggatcgctcgaacgagatcgccgac
ctcttcatgtttgatcagccttcctcgcccgagaagtgggaacgcgtctggtcgaacgtt
caggcggcctga
DBGET
integrated database retrieval system
