Shinella sumterensis: Q9314_20545
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Entry
Q9314_20545 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_20545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_20545
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_20545
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_23
AAA_15
AAA_22
AAA_16
RsgA_GTPase
nSTAND_NTPase5
AAA_18
DUF87
AAA_27
nSTAND3
AAA_30
AAA_28
MMR_HSR1
NACHT
Cytidylate_kin
ATPase_2
Zeta_toxin
Rad17
AAA_14
NB-ARC
GCP5-Mod21_N
Mg_chelatase
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
WLS11206
LinkDB
All DBs
Position
unnamed1:341266..342357
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AA seq
363 aa
AA seq
DB search
MSNASSYIRIDNVSRRYGAFKALDDVSLDISKEEFIAILGPSGSGKSTLLRLIAGLDRPT
EGRIHFEGKDVTELAPHKRGIGMVFQEFLLFPHRTVRENLAFPLRMRNEAKGEIEERVEW
VAGILSLSTMLDRYPSQLSGGQQQRVALGRGLVARPTLLLLDEPLANLDRELRQEMEIEI
RRYQKQLGIPFIYVTHNQEEALSMSDRIAVINNGRLEALGERQAIYDHPQTPFVARFVGK
SSKFQGVVEPDGATVRLTRHDYEFALPSDKTFKPGDAVEIFVKNERFDITPKQHGGAGIP
SKVVDVVLRGPFLEYVLETDRGDTVIAVKPKRNDPIPLQERVLLSWNPADCHIFKDGADD
ARR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcaagttcctacatccggatcgacaacgtgtcgcggcgttatggcgccttc
aaagcactggacgatgtcagtctggacatctccaaggaagaattcatcgccattctgggg
ccaagcgggtcgggcaaaagcacgttgctgcgcctcatcgccggcctcgatcgcccgacg
gaaggccgcatccatttcgagggaaaggacgtcaccgagctcgcaccacacaaacgcggg
atcggcatggtgttccaggagttcctgctctttccgcacaggacggtgcgcgaaaatctc
gcctttcccttgagaatgcgcaacgaggccaagggcgagatcgaggaacgggtcgaatgg
gtggccggcatcctgtcgctgagcacgatgctggaccgctatcccagccagctttcgggc
ggccagcaacagcgcgtcgcccttggccgcggccttgtggcacgtccaacgctcctgctt
ctcgatgaaccgctggccaatctcgaccgcgagctccggcaggaaatggaaatcgaaatc
cggcggtaccagaaacagctcggcattcccttcatctatgtgacgcataaccaggaagaa
gcgctctcgatgagcgatcggatcgccgtcatcaacaatgggcgcctcgaagccctgggt
gagcggcaggcgatctacgatcacccgcagacaccgttcgtcgctcgtttcgtcggaaaa
tcgagcaaattccagggtgtcgtcgagccggacggtgcgaccgtgcgcctgacccgacac
gattacgaattcgcgttgccgtccgacaagacattcaagccgggtgacgcggtcgaaatt
ttcgtcaagaacgaacggtttgacattacgcctaagcagcatggcggcgcaggcattcca
tccaaggtggtggacgtcgtgctgcgtggacccttcctcgaatatgtgctcgagaccgat
cgcggcgatacggtgatcgccgtcaaaccgaagcggaacgatccgattccacttcaggag
cgggtcctgctgtcatggaacccggccgattgccacatcttcaaggacggagctgacgat
gcaagacgctaa
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