Shinella sumterensis: Q9314_20670
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Entry
Q9314_20670 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_20670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_20670
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_20670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND3
AAA
AAA_29
nSTAND_NTPase5
T2SSE
AAA_30
AAA_22
nSTAND1
Rad17
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WLS11228
LinkDB
All DBs
Position
unnamed1:365927..367033
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AA seq
368 aa
AA seq
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MNAALQNNAATAMKLEGVSKLYGPVKALDNVSFELRKGEFLTMLGPSGSGKTTSLRAIAG
FIQPTAGRLLIDGRDMTGVPPQKRNIGMMFQDYALFPHMTVLENIGYPLETRGIKRAERE
KRSMEMLEIVGLAHCATRYPKEMSGGQQQRVALARALVFKPDIVLLDEPMAALDKKLRGQ
MQIEIMHITRQVGATVVSVTHDQEEALVMSDRIAIFKDGRLEQIGSPHELYQQPRSEFVA
DFIGEANLLHGKTRVMPDGVVVEGDGWNVSLPKDDPQGQALTATNTACVVLRPERIRAVA
PGSPGGNAGEGVIEDKIYLGVEYRLVVRMNDGSKVNIRSRDVAAIAGMKAGDRIGMAWAP
EDIVIIGA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgctctccagaacaacgccgcaacggcaatgaagctcgaaggcgtttcgaaa
ctgtacggccccgtgaaggcgctcgacaacgtatccttcgagctcaggaagggcgagttc
ctgacgatgctcggcccgtcgggttccggcaaaacgacatcgttgcgcgcaattgcgggc
ttcatccagccgacggccggtcgtcttctgatcgacgggcgtgacatgaccggcgttccg
ccgcagaagcgcaatatcggcatgatgttccaggattacgcgctcttcccccatatgacg
gtgctggagaacatcggctaccctctcgaaacgcgcggcatcaagcgtgcggagcgcgag
aagcgcagcatggaaatgctggagatcgtcggtttggcacattgcgcgacacgctatccg
aaagaaatgtccggtggccagcagcagcgcgtggcgcttgcacgcgcccttgtcttcaag
ccagatatcgtgctgctggacgagccgatggcggctctcgacaagaagctacgcgggcag
atgcagatcgaaatcatgcacattacccggcaggtcggcgcgaccgtcgtctccgtcacg
catgaccaggaagaagccctggtcatgagcgaccggatcgccatcttcaaggacggccgc
ctcgagcagatcggcagcccgcacgagctctaccagcagccgcgttccgagttcgtggcg
gatttcatcggtgaggcgaacctcctgcatggcaagacccgcgtgatgccggacggcgtg
gtcgtcgaaggcgatggttggaatgtcagcctgccgaaggacgatccgcaggggcaggcc
ctcacggcgacgaacacagcttgcgttgtccttcgtccggagcgcatccgcgctgtcgcg
cccggatcgccgggcggcaatgccggcgaaggtgtgatcgaagacaagatctatctgggc
gttgagtatcgactggtcgtgcgcatgaacgacgggagcaaggtcaatatccgtagccgt
gacgttgcggccatcgccggcatgaaggcgggagacaggatcggcatggcctgggccccc
gaggacatcgtcatcatcggtgcatga
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