Shinella sumterensis: Q9314_20700
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Entry
Q9314_20700 CDS
T09417
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_20700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_20700
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Q9314_20700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WLS11234
LinkDB
All DBs
Position
unnamed1:complement(373340..374923)
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AA seq
527 aa
AA seq
DB search
MDELTYLSKLVAKGRMSRRDFLGRSAVLGLGLAAAGSLLSTAARAEGPVRGGTIKVGMQG
GASTDSLDPGLATNQVSAMVNHLWGETLVWLAPDGSPVPVLAEEWTASADARTWTFKIRK
NVQFHDGKTLTPDDVVATIERHSDESAKSGALGVLKGIQTIKADGDAVVITLSEANADMP
FLMNDYHLVIQPNGGKDNPEAAIGTGPYRLASSEPGVRYNATRFENYWGRETAGFAEQVE
IIVINDATARIAAMQSGQVHMINRIEPKTVALLKNMKKVMIKNVSGRGFYPFNMFCDTAP
FDNKDLRLALKYAMDRETMIDRILMGYGSVGNDTPINKAYPLFEEIEQRTFDPEKAAFHF
KKSGHSGGIVLRTSEVAFPGAVDAAVLYQESAKKAGITIDVKREPGDGYWSNVWNVQPFC
TSYWGGRPTQDQMYSTGYISSADWNDTRFKNEAFDKLVVAARAELDETKRRAMYRDLSEM
MRDEGGLISPMFNDFIDGVSENILGWEDNPAGELMNADAPLRCWLSA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactgacctatctttccaagctcgtcgcaaagggccggatgtcgcggcgcgat
tttctcggccgcagcgcggtgctcggcctgggcctcgccgcggcaggatccttgctgtcc
acggcggcacgcgcggaaggcccggtgcgcggcggcacgatcaaggtcggcatgcagggt
ggcgcttcgacggacagcctcgaccccggcctggcgacaaaccaggtgagcgccatggtg
aaccatctgtggggcgaaaccctcgtttggctggcgccggacggctcgcccgtcccggtg
ctggctgaagaatggacggcctccgccgatgccaggacctggaccttcaagatccggaaa
aacgtgcagttccacgatggcaagacgctgacgcccgatgacgtcgtggcaacgatcgaa
cggcattcggacgagagcgcgaagtccggcgccctcggcgttctcaagggtatccagacc
atcaaggcggacggcgatgcggtcgtcatcacgctcagcgaagccaatgccgatatgccc
ttcctgatgaacgattatcatctggtcatccagccgaatggcggaaaggacaatccggag
gccgcgatcggaaccgggccttacagactggccagcagcgagccgggcgtccgctacaac
gcgacacgtttcgaaaactactgggggcgcgaaacggctggctttgccgagcaggtcgag
atcatcgtcatcaacgatgcgacggcccgcatcgccgcgatgcaaagcggccaggttcac
atgatcaatcgcatcgagccgaaaacggtcgccctgctcaagaacatgaagaaggtgatg
atcaagaacgtctccgggcgtggcttctatcccttcaacatgttctgcgacacggccccg
ttcgacaacaaggacctgcgcctcgccctgaaatacgctatggaccgcgagacgatgatc
gatcgtatcttgatgggttacgggagcgtcggcaacgatacgccgatcaacaaggcctat
ccgctcttcgaggagatcgaacagcggaccttcgatccggaaaaagcagccttccatttc
aagaagtccggtcatagcggcgggatcgtgctgcgcacgtcggaagtcgcctttcccggc
gccgtcgatgccgcggttctctatcaggagagcgcgaagaaggccggaatcacgatcgat
gtgaagcgcgaacccggtgacggatactggtcgaatgtctggaatgtccagcccttctgc
acctcctattggggtggccgcccgacgcaggaccagatgtattccaccggctacatttcc
tcggcggactggaacgacacgcgcttcaagaacgaggctttcgacaagctcgtcgtcgcc
gcccgcgcggaactcgacgagacgaagcggcgcgccatgtatcgcgacctctcggaaatg
atgcgtgacgaaggcggtctcatttcgccgatgttcaacgatttcatcgacggcgtcagc
gagaacattctcggctgggaggacaatccggccggcgaactcatgaacgccgatgcaccg
ttgcgttgctggctgagcgcctga
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