Shinella sumterensis: Q9314_21935
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Entry
Q9314_21935 CDS
T09417
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_21935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_21935
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_21935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WLS11471
LinkDB
All DBs
Position
unnamed1:649208..650260
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AA seq
350 aa
AA seq
DB search
MKTIVKSGILAAAAVALSASLVLPAAARDLTVVSWGGNYQDAQRNIYFKPFSEKIGKPVL
DEAWDGGIGVIQSKVKAGAPNWDAVQVEAEELALGCADGLYEKIDWDKMGGKDKFLDSAV
NDCGVGAIVWSTAIAYDGDKLAEGPKSWADFWNVEKFPGKRSLRKGPKYTLEFALLADGV
SKDELYDVLSTEEGVERAFKKLDELKPNIVWWESGAQPIQFLASGEVAMTSAYNGRITGI
NRSEGKNFKVVFPGSIYAVDSWVVLKDAENKDVAQDFIAFASQPENQAKLPESVAYGLPN
KEAAAMVPAELAKDLPTDPANLPEAIALNVDFWIDNAESLTQRFNAWLAQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcgttaaatccggaatcctggcggccgctgcggtcgccctctcggcaagc
ctggttcttccggccgctgcgcgggaccttaccgtcgtttcctggggcggcaactatcag
gacgcgcagcgcaacatctatttcaagccgttctccgaaaagatcggcaagccggtgctc
gacgaagcatgggacggtggcatcggcgtcatccagtcgaaggtcaaggccggtgcgccg
aactgggatgccgtgcaggtggaggccgaagaacttgcgctcggctgtgccgatggcctt
tacgagaagatcgactgggacaagatgggcggcaaggacaagttcctcgacagcgccgtc
aacgattgcggcgtcggcgccatcgtctggtcaacggccatcgcctatgacggcgacaag
ctggccgaggggccgaagtcctgggcagatttctggaatgtcgagaagttccctggcaag
cgttcgctgcgcaaggggccgaaatatacgctggaattcgctcttttggccgatggcgtc
tccaaggacgaactctatgacgtgctgtctaccgaagagggggtcgagcgcgccttcaag
aagctcgatgaactgaagccgaatatcgtctggtgggaatccggcgcgcagccgatccag
ttcctcgcctccggcgaagtcgcgatgacttcggcctataacggccgcatcaccggcatc
aaccgctccgaaggcaagaacttcaaggtcgtgttccccggcagcatctacgccgtcgac
agctgggtcgttctcaaggatgccgagaacaaggatgtcgcacaggacttcatcgccttt
gcgagccagccggaaaaccaggccaagctgccggaatccgttgcctacggcctgcccaac
aaggaggctgcggccatggtgccggcggagctcgccaaggacctgccgacggatccggcg
aacctgccggaagccatcgcactcaatgtcgatttctggatcgacaacgcggaatcgctg
acgcagcggttcaatgcctggctggcccagtaa
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