Shinella sumterensis: Q9314_22090
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Entry
Q9314_22090 CDS
T09417
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_22090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_22090
02044 Secretion system [BR:
ssum02044
]
Q9314_22090
Transporters [BR:
ssum02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Q9314_22090
Secretion system [BR:
ssum02044
]
Type I secretion system
Multiple protein transporter
Q9314_22090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_30
SMC_N
AAA_16
AAA_29
AAA_33
NACHT
RsgA_GTPase
nSTAND3
AAA_18
MMR_HSR1
nSTAND1
AAA_22
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WLS11653
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All DBs
Position
unnamed1:complement(682522..684303)
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AA seq
593 aa
AA seq
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MTAAVASPLRRASLGIALISGVVNVLALTSPLFMLQVYDRVLASGSVPTLVGLAILAAGL
YLFQAGLDIVRARVLLRIGEHVDGVLCGPVHDAVVRLPLVARMPGDGLQPLRDLDNVRGF
LSGQGPTAFFDLPWMPLYLGICFLFHFWIGVTALAGAVVLVSLTILANALSRKPVRESIA
HNMARNGLLEATRRNAEIVQALGLSGRLEARWLRANADYLAANRRAGDIAGGLGSLSKTL
RLMLQSAVLGVGAWLVIEQQATGGIMIASSIMVGRALAPIDLAIASWKPFLMARQSWKRL
QDLFGKIPPVPETMALPAPRRDLRVENVTILPPGEKRPTVAGVGFQIQAGSALGIIGPSG
SGKSTLSRALVGAWAAAGGKVRLDGASLDQWNREALGRHIGYLPQGVELFDGTIAENIAR
FEEDADAEAIVAAARTAGAHDLILRFEEGYKTRIGESGSSLSAGQRQRIGLARALYGDPF
LVVLDEPNANLDAEGEAAVVRAIASVRERNGIAVVVAHRPSAIGVVDQVLMMEGGRQKAF
GPRDAVLGQVLKPAHAGRNGFAATGHGIMPLRVVANPAKSEKHSEPEKTDGDT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ctgactgcggcggtcgcctcacctctcagacgagcatccctggggatagcgctcatcagc
ggcgtggtcaacgttctggcgctgacctcgccgctcttcatgcttcaggtctatgaccgc
gtcctcgcaagcggcagcgtgcccaccctcgttgggctcgccatcctggcggcagggctt
tacctgttccaggcagggctcgatatcgtccgggcgcgtgtcctgttgcgcatcggcgag
catgtggacggcgtgctctgcggccccgtgcacgatgccgtcgtgcgcctgcctctcgtt
gcgcgcatgccgggcgacgggctccagcctttgcgcgacctggacaatgtccgcggcttc
ctttccggacagggcccgaccgccttcttcgacctgccctggatgccgctctatctcggc
atctgcttcctttttcatttctggatcggcgtgacggcgctcgccggtgccgtcgtgctc
gtctccctgaccattctcgccaatgcgctgtcgcggaagcccgttcgtgagagcatcgcc
cacaacatggcccgcaacggtctccttgaagccacgcgccgcaatgccgagattgtgcag
gcgctcgggctctccgggcgactggaagcgcgttggctgcgggcgaacgcggactatctt
gccgccaaccgccgagccggcgatatcgcgggtggcctcggcagcctgtcgaagaccttg
cgcctgatgctgcaatcggcggtgctcggcgttggcgcctggctggtcatcgaacagcag
gcgaccggcggcatcatgatcgcgagctccatcatggtggggcgggcgcttgccccgatc
gacctggcgatcgcaagctggaaacccttcctcatggcgcggcagagctggaagcgcctg
caggatctgttcgggaaaatcccgcctgtgccggagacgatggctttgccggcaccacgc
cgcgaccttcgtgtcgagaacgtcaccatcctgccgcccggcgagaagcggccgacggtg
gccggtgtcggcttccaaattcaggccggcagcgcgctcggcatcatcggaccctccggc
tccggcaaatcgacgctttcgcgcgcgcttgtcggcgcatgggccgcagcgggcggcaag
gtgcgcctcgacggcgccagtctcgaccagtggaaccgcgaagcactcgggcgccatatc
ggctacctgccgcagggcgtcgagctgttcgacggcacaatcgccgagaacatcgcgcgc
ttcgaggaggatgccgacgccgaggccatcgtcgcggctgcccggaccgccggcgcccac
gatctgatcctgcgcttcgaggagggatacaagacgcgcatcggcgaatctggctcttcc
ctttcagccggtcagcgccaacgcatcgggctggcgcgggcgctttacggcgatccgttc
ctcgtcgtgctggatgagcccaatgccaatctcgatgccgaaggcgaggccgcggtcgtg
cgcgccattgcctcggtgcgcgaacgcaacggcatcgcggtcgtggtcgcgcatcgtcca
agcgccatcggcgtggtcgatcaggtcttgatgatggaggggggacgccagaaggcattc
ggcccgcgcgacgccgtcctcggacaggtgctgaagcctgctcacgcaggcagaaacggc
tttgccgcgaccggccatgggatcatgccgctgcgcgtcgtcgcaaaccccgcgaaatcc
gaaaaacacagcgagccggaaaagacagatggcgacacctga
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