Shinella sumterensis: Q9314_23075
Help
Entry
Q9314_23075 CDS
T09417
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssum03000
]
Q9314_23075
Transcription factors [BR:
ssum03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Q9314_23075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
Glyoxalase_7
Motif
Other DBs
NCBI-ProteinID:
WLS10215
LinkDB
All DBs
Position
unnamed1:900786..901796
Genome browser
AA seq
336 aa
AA seq
DB search
MTKLRPDGTVTMQSVAVAAGVSPMTVSNSFRYPQRVHEETRERVLQIAAELGYVPNHAAG
NLASGQSRVIGAVIPSIKNSSFYNYVRGMQEHVADNGYQLILKLADSLEQEAAAIRTLIG
LRVAGIALVGDEHEDSARTLLKKTGVPVVEAWVHRNPFDMAVGYSTIDATRAIVELLIVQ
GYTRIGFVGYEGDVSHRFTERLPAFIQCVEQAGLSSHRIFLIDQAHGFGAGPKALEGLCS
IDPELDAIICPTDIVAAGVLFECGRRGWKVPERLAVAGWGDYEIASEITPGITSVHPHAY
EMGQNAMSLIIERANGNTRQQVTVDTGFHIVERAST
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcttcgtccagatggaacagtcaccatgcaatcggtcgcggtggcggccggt
gtatcgccgatgacggtttcaaacagcttccgctatccgcagcgggttcacgaagaaaca
cgcgagcgcgtgctgcagattgctgccgaactgggctacgtcccgaaccacgccgccggc
aacctggcgtcaggccagagccgcgtcataggcgccgtcatcccctcgatcaagaattcg
agcttctataattatgtccgcggcatgcaggagcacgtcgccgacaacgggtaccagctc
atcttgaagctggcggacagtttggaacaggaggctgcggcaatccgcactctcatcgga
ctccgcgttgcaggtatcgcgctggtcggcgatgaacacgaggacagcgcgcgaaccctg
ctgaaaaagacaggtgtgccggttgtcgaagcctgggtgcaccggaacccgtttgacatg
gctgttggatactccacgatcgatgcaacccgcgccatcgtcgaacttcttatcgtacaa
ggctataccaggatcggtttcgtcggatacgaaggcgatgtctcgcaccgcttcaccgaa
cggctgcctgccttcatacaatgcgtcgagcaggctggcctcagcagccaccggatcttc
ctgatcgatcaggctcacggtttcggagcgggtccgaaagccctggaaggcctttgcagc
atcgaccctgaactcgacgcgatcatctgcccgacggatatcgtggccgccggcgtcctt
ttcgaatgcggaaggcgaggctggaaagtcccggaacggctggccgtggcgggatggggc
gactatgaaatagcctcggagataaccccgggcatcaccagtgtccatcctcacgcctac
gagatgggacaaaatgcgatgtcgctgatcatcgagcgagcgaacggcaacacgcggcag
caagtgacggtcgacaccggcttccatatcgtcgagcgagcgagcacttag
DBGET
integrated database retrieval system
