Shinella sumterensis: Q9314_23100
Help
Entry
Q9314_23100 CDS
T09417
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_23100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_23100
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_23100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
YqhI
Motif
Other DBs
NCBI-ProteinID:
WLS10220
LinkDB
All DBs
Position
unnamed1:905735..906805
Genome browser
AA seq
356 aa
AA seq
DB search
MIALDKFTSGKIDRRAFMTALAGLGLAATFKPGRATAETSEIVVCNWGGAALEAFQKAYG
DPFKEKSGIEVVIDGAGPSTGAIRAMVESKNVTWDATDGGMVDAATLGAGGFVEPIDYSI
VDKSLVGDGMAAEFGICNYTFANVLAYDAKKTGSQTPAGWADFFDTAKFPGKRTMCKWIQ
GQLESVLLADGVKPEEMYPLDVDRAFKKLEPLLPEIIFWESGAQSQQLFRDGEVVMGNIW
HTRANLLRKENPDLTWTWNENLLFSSAWSVPKGNPAGKKVYDFINSSLRPEGQIVLLRLM
GNGPSNPKALDMMTEEDKAVYPLAPENAKTGLRVMAEYYAENEAELQNRFLDFISR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccctggacaagttcacgtccggcaagatcgaccgccgtgcattcatgaccgct
ttggcgggcctcggcctcgccgcaacattcaagcccggccgtgcgaccgcggaaacctcc
gaaatcgtcgtctgcaattggggcggcgcagcgctcgaagccttccagaaggcctatggc
gaccccttcaaggaaaagagcggcatcgaggtcgtcatagacggcgccggtccctccacc
ggtgcgatccgcgcaatggtcgaatccaagaacgtcacctgggacgccaccgacggcggc
atggtggacgcagcgacgctcggtgccggcggcttcgtcgaaccgatcgactattcgatc
gtcgacaagtcgctggtcggcgacggcatggccgccgaattcggcatctgcaactacacc
ttcgccaatgtgctcgcctatgatgccaagaagaccggcagccagacaccggcgggctgg
gcggatttcttcgacaccgccaagtttcccggcaagcgcacgatgtgcaaatggatccag
ggccagctggaatcagtcctgctcgccgatggcgtcaagcccgaggaaatgtatccgctc
gatgtcgaccgcgccttcaagaaactggagccgctcctgcctgaaatcatcttctgggaa
tccggcgcgcaaagccagcagctcttccgcgacggcgaagtggtgatgggcaacatctgg
cacacccgggccaatcttctacgcaaggaaaacccggacctcacctggacctggaacgag
aacctgttgttctcctccgcgtggtcagtgccgaagggcaatccggccggcaagaaggtc
tatgacttcatcaattcctcgcttcggccggaaggccagatcgtgcttctgcgcctgatg
ggcaacggtccgtcgaacccgaaggcgctcgatatgatgaccgaggaagacaaggccgtc
tatccactcgcgccggaaaacgccaagaccggcctgcgcgtgatggccgaatactacgca
gagaacgaagccgagctgcagaaccgcttcctcgacttcatttcccgctaa
DBGET
integrated database retrieval system
