Shinella sumterensis: Q9314_23120
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Entry
Q9314_23120 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_23120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_23120
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_23120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_25
nSTAND_NTPase5
AAA_22
AAA_16
AAA_29
ABC_ATPase
AAA
NACHT
AAA_5
nSTAND3
AAA_14
SbcC_Walker_B
AAA_33
CysA_C_terminal
DO-GTPase2
cobW
NB-ARC
RsgA_GTPase
AAA_30
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WLS10224
LinkDB
All DBs
Position
unnamed1:909565..910638
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AA seq
357 aa
AA seq
DB search
MAFLGIRMLRKTYGSAVALDGVDLTVQAGEFVTLLGPSGSGKTTLLMSIAGFTRPDEGGI
VVDGHDVTFMDPEDRDFGLVFQGYALFPHLSVAENIAFPLKVRKWDKARIAAKVEEMLRL
VDLTDYASRKPKQLSGGQQQRVAIARALAYGPRILLLDEPLSALDRNLRESMQRELKRLH
QETGVTFIFVTHDQEEAYAMSDRIAVFHAGRIVQIGAPREIYANPQSLFVAGFLGGNNIF
KARHAAADGTLTFFGNTCSRPPRFNPAVHGKEGEVIGWVRPEDIAVGDTDAAATIRFDAT
VVDISFVGSAEKLTVTTTDGQELTLQVPMHSAVDIRPGAVLRCAVKPEAIGFLPPDI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctcggcatcagaatgctgcgcaagacctatggcagcgccgtcgctctcgac
ggcgtcgacctgacggtccaggcgggcgagttcgtgacccttctcggtccctccgggtcg
ggcaagacaacccttttgatgtcgatcgccggcttcaccaggccggacgaaggcggtatc
gtggtcgatgggcacgacgtcacgttcatggatcccgaggaccgcgatttcggcctggtg
tttcagggctatgcgctctttccccacctgagcgtcgctgaaaacatcgcctttcccctg
aaggtccggaaatgggacaaggcgcgcatcgcggcgaaggtggaggaaatgctccgcctc
gtcgacctcaccgactacgcgtcacgcaagccgaagcagctttccggcggccagcaacag
cgggtggccatcgcaagggcgcttgcctacggaccgcgcatcctgctgctcgacgaacca
ctatcggcactcgaccgcaatctcagggaaagcatgcagcgcgagctgaaacgcctgcat
caggaaaccggcgtcaccttcatcttcgtcacccacgaccaggaggaagcctacgccatg
tcggaccgcatcgcggtctttcatgccgggcggatcgtccagatcggcgcgccgcgcgag
atctacgccaatccccaatcgctgttcgtcgcgggcttcctcggcggcaacaacatcttc
aaggcccgccacgcggcggcagatgggacgcttacttttttcggaaacacgtgttcacgt
ccgccacgtttcaatcctgccgtccatggcaaggagggcgaggtcatcggatgggtcagg
cccgaggacatcgccgtcggagacacggacgccgccgcgaccatccgtttcgacgccacc
gtcgtcgacatttccttcgtcggttcggccgaaaagctgaccgtcaccaccaccgacggc
caggaactgaccctgcaggttcccatgcactccgcagtcgacatccgtcccggcgccgtc
ctccgttgcgccgtcaaaccggaagccatcggctttctgccaccagacatatga
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