Shinella sumterensis: Q9314_23960
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Entry
Q9314_23960 CDS
T09417
Name
(GenBank) ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Q9314_23960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_23960
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Q9314_23960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF2628
Motif
Other DBs
NCBI-ProteinID:
WLS10379
LinkDB
All DBs
Position
unnamed1:1086297..1087799
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AA seq
500 aa
AA seq
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MTDIQSRDVAIDRFIGSNSTYYRAAFHKIGAQRGYAPSFNMAAAIFGPVWLGGRRLWAAF
WPFLIAEILAVVLVAFALSGGAGADRAARADRLEGLAAVRLQEATAANKTDGTSSLAKAL
TRSAAALGDAARQAREEAGAANAQTSLIVTLGLALFLAARLTTGALGNQLAERRFRAWRL
GGEKAEGGFSRLHAAGVALLLGILIPTIAFHFADGELFRAFPSNPAWNSASAVWLDGVVS
AISGTVAPVANGMTNGINAALTLMEAVLIQTPWPVVMIIIVAVAWQLAGFRVFLLTAVAI
SYLAILGYWEKSMQTVALLGTAALVSIAIGIPLGILCGYKRRVAGVVRPLLDFMQTMPAF
VYLIPVIALFGIGKPSGVIATIIFGIPPVVRLTALGITSVPASVREAAIAFGASRRFILF
KVDLRTAAPSIMAGVSQTILMCLSMVVIAALIGAKGLGEDVLHALQYAAQGQGLLAGLAI
LLCAIVLDRIVQGRGTTARD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatacaaagccgcgacgtcgcaatcgaccgcttcataggcagcaacagcacc
tattatcgcgccgcgtttcacaagatcggcgcgcaacgaggatatgcgccttccttcaat
atggctgcagcgattttcggcccggtatggctcggaggccggcgcctttgggccgccttc
tggccgtttctgatcgccgaaattctcgccgttgtgctggtcgcctttgcgctttcaggg
ggcgccggcgcggaccgagcggcccgtgccgatcgtctcgagggcctagccgccgtgcgc
ctgcaagaagcgaccgccgccaataaaaccgacgggacgtcctccctggccaaagcattg
acccggtcagcggcggcccttggcgacgcggctcgtcaggcgcgcgaagaagccggtgca
gcgaatgcccaaacatcccttatcgtaacgctcggccttgccctcttccttgccgcaagg
cttaccactggcgctctcggcaaccagcttgccgagcggcgatttcgcgcctggcggctc
ggcggcgaaaaggccgaaggcggtttcagccgccttcacgcggccggcgttgcgttgctt
ctcggcatcctcattcccaccatcgctttccattttgctgacggggagctattccgggct
tttccaagcaatccagcctggaattccgcctcggccgtttggctggacggcgttgtctca
gcgatcagcggcaccgtcgcacctgtggcaaatggaatgacaaacggcatcaatgccgcc
ctcacgctgatggaagcggtgctgatccagacgccctggcccgtcgtcatgatcatcatt
gtcgcggtcgcctggcaactcgccggtttccgcgtcttcctgcttacagccgtcgctatc
agttatcttgccatccttggatactgggagaagagcatgcagaccgtggcgctcctcggt
acggctgctctggtctcgatagcgatcggcatcccgctggggattctctgcggctacaag
aggcgcgtcgccggggtcgtccgccccctccttgacttcatgcagaccatgccggccttt
gtttatctcatccctgtcatagccctctttggcattggcaagccatccggcgttatagcc
acgatcattttcggtattccgcccgtcgttcgcctgacggcgctcggcatcacgtcggtc
cccgcctccgtccgcgaagccgcaattgcctttggcgcgtcgcgacgtttcatcctcttt
aaagtcgatttgcggacggcggctccctccatcatggcgggagtcagccagacgatcctg
atgtgcctgtctatggttgtcattgccgccttgatcggcgcgaagggcctcggcgaagac
gtgctccatgcgctccaatacgccgcgcagggtcaggggctgctggcaggtctcgccatt
ctgctttgcgcgatcgttctggatcggatcgttcaaggtcgtggaacgacggcacgggat
tag
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