Shinella sumterensis: Q9314_24410
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Entry
Q9314_24410 CDS
T09417
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssum03000
]
Q9314_24410
Transcription factors [BR:
ssum03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Q9314_24410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
TrmB
HTH_CodY
HTH_20
MarR_2
Docking
Rrf2
GMT-wHTH
HTH_24
FmrO
HTH_36
HTH_Crp_2
Ribosomal_S25
HTH_IclR
HTH_5
HTH_28
MarR
HVO_A0261_N
WHD_MCM4
EAP30
Fe_dep_repress
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
WLS10457
LinkDB
All DBs
Position
unnamed1:1181784..1182464
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AA seq
226 aa
AA seq
DB search
MKDNAENLAALRIETPPATLREIALDRMRRAIIGGLFQPGERLVERTLCEQLGVSRSVIR
EVIRHLEAEGLVEMLAKQGPIVATLDWDDARQIYEIRAALESTAVADCAKVAGPEIKAAL
RKAMSELERTSRQNSPVGVLDATTEFYKIVFEAGGNNIAWEIVSRLNSRISRLRVMTLST
SNRMASGPSQIRKIFTAIDANNPDAAAAACRAHIEAAAEIAKTILA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataacgccgaaaaccttgccgccctccgcattgaaacaccgcccgcgacgctt
cgggagatcgcgctcgatcgcatgcgccgcgccattatcggcggcctgttccagccaggc
gaacgtcttgtagagcgaacgctgtgcgaacaactcggcgtttcgcggtccgtcatccgc
gaggttatccgccacctcgaagcggagggtctcgtcgagatgctggcgaaacaagggccg
atcgtcgcgacccttgactgggatgatgcacgtcagatttacgagattcgcgccgcgctg
gaatcgaccgctgttgcagattgcgcgaaagtcgccggacccgagattaaagccgcgctt
cgcaaggcgatgagcgaattagaacgcacatccagacagaactcaccggtcggcgtgctg
gacgcgacgacggagttctacaagatcgtcttcgaagccggcggtaacaatatcgcctgg
gaaatcgtcagccgactgaacagccgcatctcgcgcctgcgtgtaatgaccctctcgaca
tcgaaccgcatggcatcagggccttcgcagatcaggaaaattttcacggcgatcgatgcc
aataatccagatgcagctgcggcggcctgccgtgcccatatcgaggcggcggcggaaatc
gcaaagacgatccttgcctga
DBGET
integrated database retrieval system
