Shinella sumterensis: Q9314_24430
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Entry
Q9314_24430 CDS
T09417
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_24430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_24430
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_24430
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WLS10460
LinkDB
All DBs
Position
unnamed1:complement(1185405..1186640)
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AA seq
411 aa
AA seq
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MKDTSDVTRRSLLKTSAGAMALALGGGTPFLSSRAAWAQGADLANQQLRTIGLSVTVQER
IIEDFKKASGVGTATGTASTHPDAQTKILSGSTDYDCWETNGERLPAVVMTNNVAPIPTS
ALKNWSSIRDTFTRLAPNLPRESQIVGQIWADEAQTQLNMVPAVYNYDSIGYNPEIVSDE
EANSWTALFDSKWKGKSGLNTDPLTAFGQAIMAMNTLGLSDVKKPANPTPAEIDEAVKFL
ISKKKEGQFRALWGDFGELVNMLASGEMVVCDAWQPAVMAVKAQGRRCKYAVPKEGYRGW
AIGPVLLANSPNKEVVYAYADYWLSGPPGIAVSEQGYYSPSTKIKDVMSPEKYAFWYEGK
PWVGAEERGIKEGDLRDGGSLEERAKNVAYWHQWPDEYDHLVQKWDEFLNA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacacatctgatgtcacgcggcgttcgctgctgaaaacctccgccggcgccatg
gcgctcgccctgggcggcggcacgcccttcctgtcgtcgcgtgctgcctgggcacagggc
gctgacctcgccaaccagcagctgcgcaccatcggcctgtcggtaacggtgcaggagcgc
atcatcgaggatttcaagaaagcctcaggcgtcggcaccgccaccggcaccgcatcgacc
catcccgatgcccagaccaagattctgtcgggctcgaccgactacgattgctgggagacc
aatggcgagcgtctgccggccgtggtgatgaccaacaatgtcgcaccgatcccgacctcg
gcgcttaagaactggtcgtccatccgcgacaccttcaccaggcttgcccccaacctgccg
cgcgaatcccagatcgtcggccagatttgggctgatgaagcccagactcagctgaacatg
gtgccagccgtctataactacgactcgatcggttacaatcccgaaatcgtctccgacgag
gaagccaacagctggacggcgctgttcgactcgaaatggaagggcaagtccggcctcaac
accgatccgctcaccgctttcggccaggccatcatggccatgaacacgcttggtctctcg
gatgtgaaaaagccggccaaccccacgccggccgaaatcgacgaggcggtcaagttcctg
atctccaagaagaaagaagggcagttccgcgcgctgtggggcgatttcggcgaactggtc
aacatgctggcctcgggcgaaatggtggtctgcgacgcttggcagccggccgtcatggca
gtcaaggcgcaagggcgtcgctgcaaatatgccgtaccgaaggaaggttatcgcggctgg
gccatcggcccggtgctgctcgccaacagccccaacaaggaagtggtctatgcttacgcc
gattactggctgtccggccctcccggcatcgccgtttccgaacaaggctactattcgccc
tcgaccaagatcaaggatgtgatgtcaccagagaaatatgccttctggtatgagggtaag
ccctgggtcggcgccgaagaacgcggcatcaaggaaggcgacctgcgcgatggcggttcg
ctggaagagcgcgccaagaacgtcgcctactggcaccagtggccggatgaatacgaccat
ctggtccagaagtgggatgaattcctgaacgcataa
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