Shinella sumterensis: Q9314_25060
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Entry
Q9314_25060 CDS
T09417
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_25060
Transporters [BR:
ssum02000
]
Other transporters
Pores ion channels [TC:
1
]
Q9314_25060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Autotransporter
DUF481
Motif
Other DBs
NCBI-ProteinID:
WLS10563
LinkDB
All DBs
Position
unnamed1:1311565..1313640
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AA seq
691 aa
AA seq
DB search
MSTHLSRKLAAGVSVAALSLLPAMAPAQDTATNGATVLEAITVTGEKVSRDMKSTASSVS
IKTSREIDREKTGNATVSEVIADVPNVVYSDTVSAPVIRGQDSQGPLTGQGSFWGGTVPR
ATINLDGHYLNYNEFYFGATSVWDLDSIEVFRGPQTTSQGANAIAGAIIVNTKDPTFTPE
AAYQAEIGDYNSKRASIALSGPIVEDELAARLAIDYSGRDTFIDYVNAGFRHEGTDQDFS
ALNARLKLLWEPTDIPGLTAKLTYSHTSSNRPSQEAASRPFDALEHVTNTMPSWKQHTNT
GILDIGYDFESGIKLFNQTQYSSSNVQRATGIVNGGNADIDQANVSNETRVMFGDETDTV
SGVAGLYYARTHTDEALYLSGLSSFDDTKRNLGLFGEMSYRFAERWTLTTGLRYQNDRIE
RAGSSVFAPTPVDFDTTFSALLPKASLAYAATDDWTVGALVSRGYNPGGVSLNLNAGRWQ
PFEEESIWNYELFTRATLLDDRLTVNGNLFYMDFKNAQYTIPVVISPGVTQSYTINAEEA
HAYGLEIGADYQLLDNLTLKGSAGILRTKIDRIASNVAYEGNEFAKSPGYMITLGVSWDV
TEKFNLSGQVRHLDGYYSDTANTAAYAIEPYTIADIRASYKLHDNMEAYGYVKNVFDERA
PTYMQQNRGIGGIEASMTAPRMFGIGVKGTF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcatctttctcgcaagctcgcagccggcgtcagcgtcgcggcattgtcgttg
ctcccggcaatggcgcccgcgcaggacacagcgacgaacggcgcgacggttctggaggcc
atcactgtgacgggcgagaaggtctctcgggacatgaagagcacagcctcttcggtatcg
atcaagacgagccgagagatcgaccgggagaagacgggcaacgcgaccgtctcggaagtg
atcgccgatgtcccgaacgtcgtttattccgataccgtcagcgcgccggtcatccgcggg
caggatagccagggtccgctgaccggacagggctcgttctggggcggcacggtgccgcgc
gccaccatcaatctcgacggccactacctgaactacaacgagttctacttcggtgcgaca
tcggtgtgggatctcgacagcatcgaggtgttccgcggtccgcagaccacgtcgcagggc
gccaacgccattgccggcgccatcatcgtcaacacgaaggatccgacattcacgcccgag
gcggcctatcaggccgaaatcggcgactacaacagcaagcgagcgtccatcgccctatcc
ggccccatcgtcgaagacgagctggccgctcgtctggccattgattattccggacgcgac
accttcatcgattatgtcaatgccggtttcaggcacgaagggacggatcaggacttcagc
gccctgaacgcacgtctaaagctgctgtgggagccaaccgacattcctggcctgacggcg
aagctgacctattcgcataccagcagcaacaggccgtcgcaggaggcggcgtcacgcccg
ttcgatgcgctcgagcatgtcaccaacacgatgccaagctggaagcagcacaccaatact
gggatcctcgacatcgggtatgacttcgagagcggcatcaagctattcaaccagacgcaa
tactcgtcttcaaacgttcagcgagccacaggcatcgtcaacggcggaaacgccgatatc
gatcaagccaacgtgtcgaacgagacacgcgtcatgttcggagacgagaccgatacggtg
agtggtgttgccggcctctattacgcgcgcacgcacaccgacgaggcgctctacctctct
ggactgtcgtcgttcgatgacaccaagcgcaatctcggtctcttcggtgagatgagctac
cgatttgccgaacgatggacgctcacgacgggactgcgttatcagaacgatcgcatcgaa
cgcgccggctcttcggtcttcgcgccgacgccggtcgatttcgacacgaccttctcggcc
ctcctgccaaaagcctcgcttgcctatgcggccaccgacgactggaccgtcggcgcgctc
gtcagccgcggctacaatcccggcggcgtctccctcaatctgaatgccgggcgctggcag
cccttcgaggaagagtccatctggaactatgagctctttacccgcgcaacccttctcgat
gatcgtctgacggtgaacggcaacctgttctacatggacttcaagaacgcacagtatacc
atccccgtcgtcatctcgccgggtgttacgcaatcctacacgatcaacgccgaggaggcg
cacgcttacggcctggaaatcggcgcggactatcaactgctcgacaaccttacgcttaag
ggcagcgccggcatcctgcgcacgaaaatcgaccggatcgccagtaacgtcgcctatgag
ggcaacgagttcgcaaagtcaccgggctacatgatcaccttgggcgtgagctgggacgtg
acagaaaagttcaacctgtcgggccaggtgcgccatctcgatggctattattccgacacg
gccaataccgcagcctacgccattgagccctacacgatcgccgatatcagagcgagctac
aaactgcatgacaacatggaggcctacggctacgtgaagaacgtcttcgacgagcgcgca
ccgacctatatgcagcagaaccgcggcatcggtggcatcgaagccagcatgaccgcccca
cgcatgttcggcatcggcgtcaagggcacgttctga
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