Shinella sumterensis: Q9314_25610
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Entry
Q9314_25610 CDS
T09417
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssum
Shinella sumterensis
Pathway
ssum03030
DNA replication
ssum03430
Mismatch repair
ssum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q9314_25610
03430 Mismatch repair
Q9314_25610
03440 Homologous recombination
Q9314_25610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssum03032
]
Q9314_25610
03400 DNA repair and recombination proteins [BR:
ssum03400
]
Q9314_25610
Enzymes [BR:
ssum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q9314_25610
DNA replication proteins [BR:
ssum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q9314_25610
DNA repair and recombination proteins [BR:
ssum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q9314_25610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WLS10651
LinkDB
All DBs
Position
unnamed1:1417487..1418449
Genome browser
AA seq
320 aa
AA seq
DB search
MKQQFDLFGTGESDAKVQSVSRDGMQGAQGEIDMVHRLEETGRYRILRKLEPRAIADALR
PGFPSRGVIVDTETTGLNARKDEIIEIGIVAFSFDEAGNIGDVTGVYGGLQQPRVAIPAD
ITRLTGITDAMVAGQKIDVAQMKALIEPADLIIAHNAGFDRPFCETFSLAFAPKAWACSV
SEIDWSARGFEGAKLGYLVGQAGYFHDGHRAVDDCFALLEVLAQGGPEQGNTPFAELFAA
SQRSRVRIFAEHSPFEMKDHLKARGYRWSDGSDGRPKSWWVEVADDMLDDELRYLRAEIY
RWPDADPPFKRLTALERFKA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcagttcgacttgttcggtacgggggagtccgacgcaaaagtccagtctgtc
tccagggacggcatgcaaggggctcagggcgagatcgatatggtgcatcggctcgaagag
acgggtcgctatcgcattctacggaaactggagccccgcgccatcgcagatgcgctgcgg
ccgggctttccatcgcggggcgtcattgtcgatacggagacgacaggtctcaatgcccgc
aaggacgaaattatcgagattggtatcgtcgccttcagtttcgacgaggccggaaacatc
ggcgatgtcaccggtgtctatggcggactgcagcagccaagagtcgccattcccgccgac
atcacgcggctgaccggcatcacggacgccatggtggccggccagaagatcgacgtggcc
cagatgaaggccctgatcgaacctgccgatctgatcattgctcacaatgccggcttcgac
cgccccttctgtgaaaccttctccttggctttcgcgccgaaggcatgggcttgctcggtc
tccgaaatcgactggtccgcccgcggtttcgagggagcgaagcttgggtaccttgtcggg
caggccgggtatttccatgatggacatcgcgccgtcgacgactgcttcgcgctgctcgag
gtcctggctcagggcggaccggagcagggcaacacaccattcgccgagctcttcgcggca
agccagcgctcgcgggttcgcatctttgccgagcacagtcccttcgagatgaaggaccat
ctgaaggcccgtggttaccgatggtcggacggaagcgacgggcggccgaaatcctggtgg
gtcgaggtcgcggacgacatgctggatgacgaactccgctatctacgcgccgaaatctat
cgctggcccgacgccgatcccccgttcaagcgcctcaccgcccttgagcgcttcaaggcg
tga
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