Shinella sumterensis: Q9314_26035
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Entry
Q9314_26035 CDS
T09417
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_26035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_26035
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_26035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WLS10730
LinkDB
All DBs
Position
unnamed1:1517665..1518795
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AA seq
376 aa
AA seq
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MIDDSKRAKPFNLSRRELLRHGANAALFATIASQVDLTRPAFANEQKLTGPLNVLAWSGY
NDPELMKGFTELTGVELNVKEAESNGAQLSLVQAGTVKFDVINPDAVWTSKFAEAGLTLP
IETAKLASIEETMPMFRNRPETMYDGQVYAIPTRFGVNGFVYWPDKISAEAALDAELAWD
PSLKGRVEIIDWPELYLWMTGKWLGMETPETATGDDLQKILDKMIAFRPNMRALQSDMGT
VKTDLANREAWMVWGSSSDNVRTTARLSGGNVDLAIPKQGGAMWMETLQIVRGTEHLASA
LAYIDYMTSAKAMKQMAWGADKFAVTNSKVKDLLTADQVKALGLDMMEEWVSKCTMSQAP
VDDMAWADAWQTFKAG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgacagcaagcgcgcaaagccgttcaacctctcgcgccgggagctcctgcgt
cacggtgccaatgccgcactgttcgcgaccatcgcctcgcaggtcgacctgaccaggccc
gctttcgcgaacgagcagaagctgacgggcccgctcaacgtgctggcatggtccggctac
aatgatcccgaattgatgaagggcttcaccgagctcaccggcgtcgagctcaacgtcaag
gaagccgagagcaacggtgcccagctcagcctcgtacaggccggcacggtcaagttcgac
gtcatcaacccggacgctgtctggacctcgaagttcgcggaagcgggcctgaccctgccc
atcgagacggccaagcttgcctcgatcgaagagaccatgccgatgttccgcaatcggccc
gagaccatgtatgacggtcaggtttacgccatcccgacccgtttcggcgtgaacggcttc
gtctactggcccgacaagatctccgcagaagccgcactcgacgcagagcttgcatgggat
ccgtcgctgaagggccgggtggagatcatcgactggccggaactctatctctggatgacc
ggcaaatggctgggcatggagacgccggaaaccgcgaccggcgacgatctgcagaagatc
ctcgacaagatgatcgccttccgtccgaacatgcgtgccctgcagagcgacatgggtacg
gtcaagacagacctggccaaccgcgaggcctggatggtctggggttcgtcgagcgacaac
gtgcgcacgacggcccgcctgtccggcggcaatgtcgatctcgccattcccaagcagggc
ggcgcgatgtggatggaaacgcttcagatcgtgcgcggcacggagcaccttgcgtctgcc
ctggcctatatcgactacatgacgagcgccaaggccatgaagcagatggcatggggggcc
gacaagttcgcggtcaccaattccaaggtcaaggatctgctcaccgccgatcaggtcaag
gcgcttggcctcgacatgatggaggaatgggtttccaaatgcacgatgagccaggcgccc
gtcgacgacatggcctgggccgatgcctggcagacattcaaggccggctga
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