Shinella sumterensis: Q9314_26055
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Entry
Q9314_26055 CDS
T09417
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_26055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_26055
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_26055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
RsgA_GTPase
AAA_30
AAA_21
nSTAND1
AAA_22
nSTAND3
AAA_29
AAA_16
AAA_25
Rad17
AAA_28
ORC-CDC6-like
RNA_helicase
Mg_chelatase
NB-ARC
ATPase_2
NACHT
AAA_19
nSTAND_NTPase5
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WLS10734
LinkDB
All DBs
Position
unnamed1:1521276..1522355
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AA seq
359 aa
AA seq
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MTNTKPPAVEIDAITKSYGETTAIRGVSMDVRDGEFVTILGPSGCGKSTLLRMISGFAEP
TTGDVRIGGKSVVGLAPYKRDTAMVFQDYALFPHRTIAENIAFGLRMRKVERAEIARRVD
EMLALINLSGYGGRRVSEISGGQAQRVALGRALVVRPSVLLLDEPLGALDMKLRKQMQAE
LKKIHRELGLTFVAVTHDQEEALTLSDRIAVMNAGSVEQFADPETLYRRPATRFVADFVG
GANLIDAEVGPAGALLFRGLPLSGIGSDAVKDRAIGDKVSLVVRPECVATSALGGQAPGP
AIEAMVTEVLFSGAVQQIVGRLADGSLFVAHEQGLKPPPERGSTVLFHWDGSLSWLVAR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataccaagcctccggccgtcgagatcgacgccatcaccaagtcctatggcgag
accaccgcgatccggggcgtgtccatggacgtgcgcgacggcgagttcgtgaccatcctg
ggcccgagcggatgcgggaaatccacgctgctgcgcatgatcagcggtttcgccgagccg
acgacgggcgatgtgcggatcggtgggaagtccgtggtggggcttgcgccctacaagcgc
gataccgcgatggtcttccaggactatgcgctgtttccgcaccgcacgatcgccgaaaac
atcgcgttcggcctgcggatgcgcaaggtcgaacgtgcggaaatcgcacgccgcgtcgat
gagatgctcgcgctgatcaacctgagcggctacggcgggcggcgcgtcagcgagatttcg
ggtggccaggcgcagcgcgtggcgctggggcgcgcgctcgtggtgcggccatccgtcttg
ctgctcgatgagccgcttggcgcgctggacatgaaactgcgcaagcagatgcaggccgag
ctgaagaagatccaccgtgagctcgggctgacctttgtcgccgtcacccatgaccaggaa
gaggcgctgacgctttccgaccgcatcgccgtcatgaacgcgggcagcgtcgagcagttc
gccgatcccgagaccctttatcgccggccggccacgcgcttcgttgcggatttcgtcggc
ggcgccaatctgatcgatgccgaagtcgggccggctggtgccctgcttttccgtgggctg
cccctgagcggcatcgggtcggacgccgtgaaggaccgcgccatcggcgacaaggtctcg
ctggtcgtgcgtcccgaatgcgttgccacgtcggcactcggcggccaggcgccgggtccg
gccatcgaggctatggtgacggaagtgctgttttccggcgccgtgcagcagattgtcggg
cgtctagccgacggctcgctgttcgtcgcgcacgaacagggactcaagccgccgcccgaa
cgcgggtcgactgtgctgtttcactgggacgggtcgctgtcctggctggtcgcccgctga
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