Shinella sumterensis: Q9314_27175
Help
Entry
Q9314_27175 CDS
T09417
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ssum
Shinella sumterensis
Pathway
ssum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9314_27175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_27175
Transporters [BR:
ssum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q9314_27175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WLS11860
LinkDB
All DBs
Position
unnamed2:63259..64368
Genome browser
AA seq
369 aa
AA seq
DB search
MSDHFKMDGLEILAMRAAKGEIRRRDFVKGAALLMATPLALRATTAFAADNLVVANWGGD
ALTAYKDAFADVFNKTAGMGLTIDGSGPTEGAIKAQIASGKVIWDVIDTDPNIGIDFGRK
GNLEAIDYSVVDRSKVHSHTAHEFAVGNFFYSFVLAYDSEKYAERPPVTPADFWNVSEFP
GKRTMYKWMNGMVEAALLADGVPKDKLYPLDIDRALSKIEELKPHIISFWGSGADSQQAL
LEGEASMGYVWSTRAGLMERDTDGKIKSSFDSGFLAYDAWMVLKQNPAGKQAAMQFIAAA
QDPEAQAILFKLLGNGPINPEAEKFIPADQQKFNPGSAENVAKQVLLDAEWYTDNYSASL
EKFLAMVSG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcattttaaaatggatggactggaaattctcgcaatgcgcgccgccaagggg
gaaattcgccgccgcgatttcgtcaagggcgcagcactgctgatggctacgccgctggca
ttgcgcgcgacaaccgcgtttgcggcggataacctcgtcgtggcgaattggggtggcgac
gccctgacggcttacaaggatgcatttgccgacgtctttaacaagacagccggaatgggg
ctgaccatcgatggcagtgggccgaccgaaggcgcgatcaaagctcagattgcgtctgga
aaagtgatatgggacgttatcgatacagatcccaacatcggtatcgatttcgggagaaag
ggaaaccttgaggcgatcgattacagtgtcgtggaccgctcgaaagttcattcccacacc
gctcacgaattcgccgtgggcaatttcttctacagcttcgtgttggcctacgattccgaa
aaatacgcggagcggccaccggtgacaccagcagatttctggaacgtctccgagtttcca
ggcaagcgcacgatgtacaaatggatgaatggcatggtcgaggcagccttgctcgccgat
ggtgttccaaaggacaagctctacccgctggatatagatcgggcgctgagcaagatcgag
gaactcaagccacatattatcagcttctgggggtccggtgcagatagccagcaggcgctt
ctcgaaggagaggcctcgatgggatatgtgtggagcactcgcgccgggctcatggagcgc
gacaccgacggcaagatcaagtcgtcattcgattcaggtttcctggcctatgatgcctgg
atggttcttaagcagaacccggctggcaaacaggcagcgatgcagtttattgcggcggcg
caggatccggaagcgcaagcaatccttttcaagctcctgggcaatggcccgatcaatccg
gaggccgagaaatttattcctgctgaccagcagaagttcaaccctggctctgccgagaat
gtggcaaagcaagttctacttgatgcggaatggtacactgacaactactccgccagcctg
gagaaattcctggcaatggtatccggctga
DBGET
integrated database retrieval system
