Shinella sumterensis: Q9314_28545
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Entry
Q9314_28545 CDS
T09417
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00521
Streptomycin biosynthesis
ssum00523
Polyketide sugar unit biosynthesis
ssum00525
Acarbose and validamycin biosynthesis
ssum00541
Biosynthesis of various nucleotide sugars
ssum01100
Metabolic pathways
ssum01110
Biosynthesis of secondary metabolites
ssum01250
Biosynthesis of nucleotide sugars
Module
ssum_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Q9314_28545 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Q9314_28545 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Q9314_28545 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Q9314_28545 (rfbB)
00525 Acarbose and validamycin biosynthesis
Q9314_28545 (rfbB)
Enzymes [BR:
ssum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Q9314_28545 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WLS12015
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Position
unnamed4:27952..29007
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AA seq
351 aa
AA seq
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MRILVTGGAGFIGSALVRHLVKNVGAEVLNVDKLTYAGNLASLKEIEGASNYQFLRADIC
DLQKMSEAMTSFRPDRIMHLAAESHVDRSISGAADFVQTNVMGTFSLLESARHYWNDLSA
ARKEVFRFLHVSTDEVYGSLGDEGLFEEVTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPYHFPEKLIPLIILNAMDGKPLPVYGQGVNVRDWLYVEDHARALDLIASQ
GRPGEKYNVGGRNERRNIDVVRRICSLMDELRPKATPHADLITYVTDRPGHDARYAIDAT
KLETELGWKAAENFDSGIERTVRWYLDNAWWWRPLRDGVYSGERLGVLRKG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctcgtgaccggcggagcagggtttattggttcggcccttgtgcgtcatctc
gtcaagaacgtcggcgccgaggtactgaacgttgataagctgacctatgccggcaacctc
gcctcgttgaaggaaatcgagggcgcttcgaactaccagttcctgcgggcggatatctgc
gatctgcagaaaatgtctgaggccatgacctcgttccggccggaccggatcatgcatctg
gccgctgaaagtcatgtcgaccgctcgatcagcggtgccgccgatttcgtgcagacgaat
gtgatgggcacgttctcgctgttagagtctgcccgtcactactggaacgatctttctgcg
gcacgtaaggaggtcttccgtttcctgcatgtctcgaccgacgaagtctacgggtcgctt
ggcgatgaaggattattcgaggaagtcacgccttacgatccgtcttcgccgtactcggct
tcgaaagcggcgagcgaccacctggcgattgcctggcaccgcacctacggtctcccagtc
gtggtttccaactgctcgaacaattacgggccctatcattttccggagaagctgatcccg
ctgatcatcctcaatgcgatggatggaaagccgcttccggtctacggccagggtgtgaac
gtccgagactggctctatgtggaggatcacgcacgcgcgcttgatctgatagcctcacag
ggacgaccaggcgaaaaatacaacgtcggtggccgcaacgagcgccgcaacatcgatgtg
gtcaggcgcatctgctccttgatggatgagctgcgcccgaaggcgacaccgcatgcggac
ctcatcacctatgtcaccgaccggcctggccatgatgctcggtacgccatcgacgccacc
aagctagagacggaactgggttggaaggctgcggagaatttcgacagtggcatcgagcgc
accgtgcgctggtatctggacaacgcctggtggtggcggccgctgcgcgatggcgtctac
tcgggcgaacgccttggcgtgctgaggaagggctga
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