KEGG   Shinella sumterensis: Q9314_28545
Entry
Q9314_28545       CDS       T09417                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
ssum  Shinella sumterensis
Pathway
ssum00521  Streptomycin biosynthesis
ssum00523  Polyketide sugar unit biosynthesis
ssum00525  Acarbose and validamycin biosynthesis
ssum00541  Biosynthesis of various nucleotide sugars
ssum01100  Metabolic pathways
ssum01110  Biosynthesis of secondary metabolites
ssum01250  Biosynthesis of nucleotide sugars
Module
ssum_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:ssum00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    Q9314_28545 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Q9314_28545 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    Q9314_28545 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Q9314_28545 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    Q9314_28545 (rfbB)
Enzymes [BR:ssum01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     Q9314_28545 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 adh_short KR NAD_binding_10
Other DBs
NCBI-ProteinID: WLS12015
LinkDB
Position
unnamed4:27952..29007
AA seq 351 aa
MRILVTGGAGFIGSALVRHLVKNVGAEVLNVDKLTYAGNLASLKEIEGASNYQFLRADIC
DLQKMSEAMTSFRPDRIMHLAAESHVDRSISGAADFVQTNVMGTFSLLESARHYWNDLSA
ARKEVFRFLHVSTDEVYGSLGDEGLFEEVTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPYHFPEKLIPLIILNAMDGKPLPVYGQGVNVRDWLYVEDHARALDLIASQ
GRPGEKYNVGGRNERRNIDVVRRICSLMDELRPKATPHADLITYVTDRPGHDARYAIDAT
KLETELGWKAAENFDSGIERTVRWYLDNAWWWRPLRDGVYSGERLGVLRKG
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcgtattctcgtgaccggcggagcagggtttattggttcggcccttgtgcgtcatctc
gtcaagaacgtcggcgccgaggtactgaacgttgataagctgacctatgccggcaacctc
gcctcgttgaaggaaatcgagggcgcttcgaactaccagttcctgcgggcggatatctgc
gatctgcagaaaatgtctgaggccatgacctcgttccggccggaccggatcatgcatctg
gccgctgaaagtcatgtcgaccgctcgatcagcggtgccgccgatttcgtgcagacgaat
gtgatgggcacgttctcgctgttagagtctgcccgtcactactggaacgatctttctgcg
gcacgtaaggaggtcttccgtttcctgcatgtctcgaccgacgaagtctacgggtcgctt
ggcgatgaaggattattcgaggaagtcacgccttacgatccgtcttcgccgtactcggct
tcgaaagcggcgagcgaccacctggcgattgcctggcaccgcacctacggtctcccagtc
gtggtttccaactgctcgaacaattacgggccctatcattttccggagaagctgatcccg
ctgatcatcctcaatgcgatggatggaaagccgcttccggtctacggccagggtgtgaac
gtccgagactggctctatgtggaggatcacgcacgcgcgcttgatctgatagcctcacag
ggacgaccaggcgaaaaatacaacgtcggtggccgcaacgagcgccgcaacatcgatgtg
gtcaggcgcatctgctccttgatggatgagctgcgcccgaaggcgacaccgcatgcggac
ctcatcacctatgtcaccgaccggcctggccatgatgctcggtacgccatcgacgccacc
aagctagagacggaactgggttggaaggctgcggagaatttcgacagtggcatcgagcgc
accgtgcgctggtatctggacaacgcctggtggtggcggccgctgcgcgatggcgtctac
tcgggcgaacgccttggcgtgctgaggaagggctga

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