Simiaoa sunii: H9Q77_01385
Help
Entry
H9Q77_01385 CDS
T08120
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ssun
Simiaoa sunii
Pathway
ssun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9Q77_01385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssun03019
]
H9Q77_01385
Messenger RNA biogenesis [BR:
ssun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9Q77_01385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QNM02852
UniProt:
A0A7G9FWC0
LinkDB
All DBs
Position
285052..286728
Genome browser
AA seq
558 aa
AA seq
DB search
MKKKKENSNASGLKIIPLGGLEQIGMNITAFQYEDSIIVVDCGLSFPADDMLGIDLVIPD
VTYLKDNIDKVKGFVITHGHEDHIGALPYVLRDINVPIYATRLTMGIIENKLTEHNLMKK
TKRKVVKFGQSINLGDFRVEFIKTNHSIVDAAALAIYSPAGIVVHTGDFKVDYTPVYGDA
IDLQRFAEIGKKGVLALMCDSTNAERPGFTPSEKTVGKTFDTLFEEHKNTRIFVATFASN
VDRVQQIINTAYKFGRKVAVEGRSMVNILDTAIKLECINIPENTLVDLDQMKNYPDEQQV
IITTGSQGESMAALSRMANNMHRKITIGAGDTVIFSSNPIPGNEKSVTKIINELLRKGAD
VIFQDAHVSGHACQEEIKLIYTLIHPKYAVPVHGEYKHLKAQAKIAESLGISKDNIFILS
SGDVLEVSEEQAKVAGRVPVGAILVDGLGVGDVGNVVLRDRQHLAEDGIMIVVMSLDRAS
GELVAGPDIVSRGFVYVKESDELIEEARRTVDDALQACLDKGITDWGKLKTTTKDVLSDY
VWKKTKRRPMILPIIMEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaaaaagagaatagtaacgcttcaggcctgaagatcattcctttgggcggt
ctggagcagattggtatgaacattactgccttccagtatgaggacagtattattgtggtg
gactgcggactgtctttccctgcggatgatatgctgggaatcgatctggtcattcccgat
gtaacatatctgaaggataatatcgataaggtaaagggatttgtcatcactcatggacat
gaggatcatatcggagcactgccctatgtgctgcgtgatatcaatgtgcccatctacgca
acccgtctgaccatggggatcattgagaacaagctgacagagcataatctcatgaagaag
accaaacgcaaagtggtgaagttcggtcagtccatcaatctgggtgatttccgtgtggaa
ttcatcaagacgaatcacagcatcgtagatgctgcagcactggcaatttattcccctgcc
ggtatcgtggtacacaccggagacttcaaggtagactatactccggtctatggagatgcc
attgatttacagcgttttgccgagatcggtaaaaagggtgtactggcactgatgtgcgat
tccaccaatgccgagcgtcccgggtttaccccttccgagaagaccgtaggtaagacgttt
gataccttatttgaagaacataaaaataccagaatttttgtggcgactttcgcatccaat
gtggatcgggtacaacagatcatcaacacagcctataaatttggccgtaaagtagctgtg
gaaggtcgcagtatggtgaatattctggataccgccatcaagctggagtgcattaatatt
cccgaaaacactctggtggatctggatcagatgaaaaattatcccgatgaacagcaggtg
atcatcaccaccggaagccagggcgagagtatggcagccctgtcccgtatggccaacaac
atgcaccgcaagatcaccatcggcgcgggagatacggttattttctcctccaacccgatc
ccgggaaatgagaagtcggttaccaagatcatcaatgaattgcttcgcaagggcgcagat
gttatttttcaggatgcccatgtatccggacacgcctgtcaggaagagatcaagctgatc
tacacgctgatccatccgaagtatgcggtgcccgtgcatggtgaatataaacacctgaaa
gcacaggcaaagatcgcagagagccttggtatcagcaaggacaatattttcatcctctct
tccggagatgtgctggaagtcagcgaggaacaggcgaaagttgccggaagggtacccgtc
ggtgcgatcctggtagacggactgggtgtcggtgatgtaggaaatgtggtcctcagagat
agacagcacctggcagaagatggtattatgatcgtggttatgagtctggatagggccagt
ggtgagctggtagccggtccggatatcgtatccagaggttttgtatatgtgaaggaatcc
gatgaactgatcgaggaagcacgccgcactgtggatgatgcactgcaggcatgcctggat
aagggaattacggattggggcaagctgaagaccaccaccaaggatgttctcagtgattat
gtgtggaagaagaccaagagacgtcccatgatccttcccatcatcatggaagtgtag
DBGET
integrated database retrieval system