Serratia surfactantfaciens: ATE40_000210
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Entry
ATE40_000210 CDS
T06779
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssur03021
]
ATE40_000210
Transcription machinery [BR:
ssur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ATE40_000210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
COG2_N
Motif
Other DBs
NCBI-ProteinID:
AOE97763
LinkDB
All DBs
Position
complement(50426..53332)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMITLLFPATGENRLYARNDSPITRVMFNPGDT
VSSHEGWQLQVEEVKEENGLLTYIGTRLDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYAEAKL
DSSNPFETEQLVICSLDFVRRNKQRLEELADAQWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPNRFHDYGEFVAEQQKYRPVADAVTLLL
SGERLADDKLNLLGELIDEQDIEPLLKAANSEGDNAEQARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPHRNLHQIKLPLPTQYQTAIKVSGIMGAKKSVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLLANRNEKVLVICAKADTALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQIMVPYLEHTAQAVLGRWFHEGLDAFEHTCPTGRTIYDSCYEQLIGFLAAPTEQ
EGLDEFIHACRQQHDQLKAQLEQGRDRLLEMHSNGGDKAQALAAAIAEQDNDVNLVGFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDRDQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAESLVEAQAR
TLIEQAKQEADDKLSAELTRLEALKAVNPNIRDDEVETLEFNRRQVLANLNEAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttactcttggtcaacgctggatcagcgacacggaaagcgaattaggattggga
accgtcgtggcgctggatgcgcgcatgattaccctgcttttccccgccaccggtgaaaac
cgcctctatgccagaaacgattcgccgatcacccgcgtgatgttcaacccgggcgatacc
gtcagcagccacgagggctggcagctgcaggtggaagaggtgaaagaggaaaacggtctg
ttgacctatatcggcacccgtctggacacccaggaaagcggcgtggcgatgcgcgaagtg
ctgctggacagcaaactgaccttcagcaaaccgcaggatcgtctgttcgccggccagatc
gaccgcatggaccgtttcgcgctgcgttttcgcgcgcgcaaataccagagcgagcagtat
cgcctgccgttcgccggcctgcgcggcatgcgcgccagtctgatcccgcaccagctgcac
atcgcccatgaagtcggccagcgccatgcgccgcgcgttctgctcgcggacgaagtcggc
ctcggcaaaaccatcgaagccggcatgatcatccaccagcagctgctggcgggccgcgcc
gagcgcgtgctgatcgtggtgccggaaacgctgcagcaccagtggctggtggagatgatg
cgccgcttcaacctctacttctcgctgtttgacgacagccgctacgccgaagccaagctc
gacagcagcaacccgttcgagaccgaacagctggtgatctgctcgctggacttcgtgcgc
cgcaacaagcagcgtctggaagagctggcggacgcccagtgggacctgctggtggtcgat
gaagcgcaccacctggcctggagcgaagaagcgccgagccgcgaatatcaggtgatcgaa
cagctggccgagcatatccccggcgtgttgctgctgaccgccaccccggaacagctcggc
caacagagccactttgcgcgcctgcgcctgctcgatccaaaccgtttccacgactacggc
gagttcgtcgccgagcagcagaaataccgtccggtggccgacgccgtcaccctgttgctg
agcggtgagcgcctggctgacgacaagctgaacctgctgggcgagctgatcgacgagcag
gacatcgagccgctgctcaaagccgccaacagcgaaggcgacaacgccgagcaggcgcgc
caggagctggtttcgatgctgatggatcgccacggcaccagccgtgtgctgttccgcaac
acccgtaacggcgtgaagggcttcccgcaccgcaacctgcaccagatcaagctgccgttg
ccgacccagtatcagaccgcgatcaaagtctccggcatcatgggcgctaaaaagtccgtc
gaagcccgtgcgcgcgacatgctgtacccggagcaaatctaccaggaattcgaaggcgaa
aacgccacctggtggaacttcgacccgcgcgtcgaatggctgctggattacctgctggcc
aaccgcaacgaaaaagtgctggtgatctgcgccaaggccgacactgcgctgcagctggag
caggtgctgcgcgaacgtgaagcgatccgcgccgcggtgttccacgaagggctgtcgatc
atcgagcgcgaccgcgccgccgcctacttcgcctccgaagaggaaggcgcgcaggtgctg
ctgtgttccgagatcggttccgaaggccgcaacttccagttcgccagccagctggtgatg
ttcgatctgccgttcaacccggacctgctggagcagcgtatcggccgtctggaccgtata
ggccagatgcacgacatccagatcatggtgccttacctggagcacaccgcgcaggcggtg
ctgggccgctggttccacgaagggctggacgccttcgagcacacctgcccgaccggccgc
accatctacgacagctgctatgagcagttgatcggttttctggccgcgccgaccgagcag
gaagggctggacgaattcatccacgcctgccgccaacagcacgatcaattgaaagcgcag
ttggaacaggggcgcgaccgcctgctggagatgcactccaacggcggcgataaagcccag
gcgctggccgccgccatcgccgagcaggataacgacgtcaacctggtgggctttgcgctc
aacctgttcgacatcgtcggcatcaatcaggaagaccgcagcgacaacctgatcgtgctg
acgccgtccgaccatatgctggtgccggacttcccgggcctgccgcaggacggctgcacc
gtcaccttcgaccgcgatcaggcgctgtcgcgcgaagacgcgcagttcgtcagctgggaa
cacccgatcattcgcaacggcctggatctgatcctgtccggcgataccggcagctgtgcg
gtgtccctgttgaaaaacaaagcgttgccggtcggcaccctgctggttgagctggtgtac
gtggtggaagcccaggcgccgaagcacctgcagctgacccgcttcctgccgccgacgccg
atccgcatgctgatggatcgcaagggcaccaacctggcggcgcaggtcgagttcgaaagc
ttcaaccgccagttgaacgcggtcaaccgccacacctccagcaagctggtcaacgccgtg
cagcaagacgtgcacgccatgctgcagcaggcggaaagcctggtcgaagcacaggcgcgc
acgcttatcgagcaagccaaacaagaggcggacgacaagctgagcgccgagctgacgcgt
ctggaagcgctgaaagcggtcaacccgaacattcgcgacgacgaagtcgaaacgctggag
ttcaaccgccgtcaggtgctggccaacctcaatgaagccggctggcgcctggatgccatt
cgtctggtggtggtcacccaccagtaa
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