Serratia surfactantfaciens: ATE40_000685
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Entry
ATE40_000685 CDS
T06779
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssur03016
]
ATE40_000685
Enzymes [BR:
ssur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ATE40_000685
Transfer RNA biogenesis [BR:
ssur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATE40_000685
Prokaryotic type
ATE40_000685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOE97854
LinkDB
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Position
165395..166441
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AA seq
348 aa
AA seq
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MDMANLTWLHGRPQSTGVLKANPEDFVVVEDLGFAPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHMPGKETPDFSRFTLEGCEVLSYARHLRKM
RIGTLKGNHFTLVLRQISDRQDVERRLQAIAAQGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNQIAGRRLADGLQRTVLEGDALQLSGRGSWFVAKADEL
ETLQQRLDAGELAITAPLPGDGEPGTAGQVLAFEQQCLAEQPELLTLLKRERVEPARRAL
LLQPQNMLWNWWDDVTVELRFWLPAGSFATSVVREIMQQDDSDADITE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcgaatctgacctggctgcatggccgcccgcagagcaccggggtgctgaaa
gccaatccggaagatttcgtggtggtggaagacctgggttttgcaccggacggcgaaggc
gagcacgtgctggtgaacatccgtaaaaatggctgcaatacccagttcgtggccgactat
ctggcgcgcttcgccggcattcacgcccgttccgtcagctatgcgggcttgaaggatcgt
cacgcggtgaccgaacagtggttctgcctgcatatgccgggcaaggaaacgccggacttc
tcccgctttacgttggaaggctgcgaggtgctctcgtatgcccgtcacctgcgcaagatg
cgcatcggcactctgaagggcaaccactttacgctggtgctgcgccagatttccgatcgg
caggacgtggagcgccgcttgcaggcgatcgccgcacagggcgtgccgaactactttggc
agccagcgtttcggccgcggcggcaacaacctggtgatggcgcgccgctgggcgaatgac
gaaatccgcgtcaaagagcgcagtaaacgcagcttctacctgtccgccagccgcagcgcg
ctgttcaatcagattgccggccggcgcctggccgatggactgcagcgcaccgtgctggaa
ggggatgccctgcagctgagtgggcgcggcagctggttcgttgccaaagccgatgagctt
gagacgttgcagcaacggctggatgccggcgagctggcgatcacggcgcccttgccgggt
gacggcgagccgggcaccgccggccaggtattggcttttgaacaacaatgcttggcggaa
caaccggaattgcttacgcttttaaagcgcgagcgtgtcgaacccgctcgtcgggccctg
ctgctgcagccgcaaaatatgctgtggaactggtgggatgacgttaccgtggagctgcgt
ttctggttgccggcaggcagcttcgcgaccagcgtggttcgcgagatcatgcagcaggat
gacagcgatgcggatattactgagtaa
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