Serratia surfactantfaciens: ATE40_001675
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Entry
ATE40_001675 CDS
T06779
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_001675
DNA repair and recombination proteins [BR:
ssur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATE40_001675
Archaeal homologous recombinant proteins
ATE40_001675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
TsaE
NTPase_1
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOE98035
LinkDB
All DBs
Position
complement(353563..356814)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLEITAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDGLHQRASGIELLNDEQRHSLAEQLTALSGQESALGEQTRQ
QQQALSWLQQWQRFRQQQNEGRQRLENAQREQAEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAALLTQQQEQQSAQLAPLQQAVEKTRLAQQAHAEHMRQQQQLIDEQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAQQQAALEQLTVQRNQLTTQGAQHQQQLNALTQA
LAVQQQQQQALEAQTPLAPLRQRLSALADLRPTRQQLSTLATLHRQTRERLTRQQAEHAG
RQTQLAELQQQLESARQQFKQHKAQLQEVERIHELEKRIVSLEAERALLQSGAPCPLCGS
TTHPAVEQYQAVQPSATERRLVEMRTLAEKLQTQGTELRTRCESLLEQQQRQQQTIAQDE
QQLAGQQQQWQQLSAPLAFDFTLADDEPLSAWLSGCDDEERRGQQALQQHEQSAQAVQQA
KDALAALQTQQQQAQQQLALLEERFTLLQKNHADSLQQQQDLQQRWQEGEKILAERRAQR
LALFGEQRVAEVREQLRAKQTACEQASVQAAEQWQKAQELRERLAGQQAGLQQQHAQMQE
RLQQAQQQWQQALADSEFVDETAFAAALLDDALRRELQQRKEQLQQRQVEATALLTQATQ
TLEQHRQNRPEGLDEANADIDALTQSLAELAQQLKVLQLRQGELRNQLESDAARRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANNQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcttaaaaaacctcaactcgctgcagggcgaatggaagatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaaccaccctgctggacgccatctgcctggcgctataccaccagacgccgcgc
ctcaacgtcacgccaagccagaatgaactgatgacccgccataccgccgaatcgttggcg
gaagtcgagttcgaggtcaagggcgtcggctatcgcgccttctggagtcagcgccgcgcc
aaaaacgcgccggacggcaacctgcaggcgccgaaagtcgaactggcccgccgcgaagac
ggcaagatcctggcggacaaagtgcgcgacaagctggagatcaccgccgccatcaccggg
ctggacttcggccgcttcaccaagtcgatgatgctgtctcaggggcagttcgccgccttc
ctcaacgccgacgccaacgatcgcgccgagctgttggaagaactgaccggcaccgaaatc
tacgggcgattgtccgaacaggtgttcgaatcccacaaacaggccaaaaccgatctggat
gggctgcatcagcgcgccagcggtatcgagctgctgaacgacgaacagcgccactccctg
gccgaacagctgacggcgctgagcgggcaggaaagcgctctcggcgagcaaacccggcaa
cagcaacaggcgctgagctggttacaacaatggcagcgattccggcaacagcaaaacgag
gggcggcaacggctggaaaacgcccaacgcgagcaggccgaggccgccccgcagctccag
cggctggcgctcagcgaaccggccgaaaaattgcggccgctgcgcggcgaacgcgatcgc
tgccgcgccgagctgcagacgatacagcagcaagcggccctgctgacgcagcagcaggaa
cagcagtcggcgcagctggcgccgctgcagcaggcggtagaaaagacccgcctggcgcag
caagcccatgccgagcacatgcggcaacagcaacagctgatcgatgagcaggtcgccccg
ctcgatcatcagatcgcccaactgcaatcgacacaggccgaacggcgacaggccggcgat
gctgccgcgcagcagtgcgcccaacagcaggcggcgctggagcagctcaccgttcaacgc
aatcaactgacgacgcagggcgcacagcatcagcagcaattgaacgcgctgacccaagcg
ctggccgttcaacagcagcagcagcaagcgctggaggcgcaaacgccgctggccccgttg
cgccagcgcctgagtgccctggcagatctgcgtccaacgcgtcagcagttgtccacgctc
gccaccctccaccgtcagacccgcgagcggctgacccggcagcaagcggagcacgccgga
cgacaaacgcaactcgccgagctgcaacaacagctggagagcgcacgccagcaattcaaa
caacacaaggcgcagctgcaggaagtagagcggatccacgagctggaaaaacgcatcgtc
agcctggaagcggagcgtgccctgctgcaaagtggcgccccctgcccgctgtgtggctcg
accacccacccggcggtggagcaatatcaggcggtgcagccttcggcgacggagcggcgg
ttggttgagatgcgcaccctggcagagaaactgcaaacccagggtaccgaactgcgcacc
cgctgcgaaagcctgctggaacagcagcagcgccagcagcaaaccatcgcgcaggatgaa
cagcagctggccggccaacagcagcagtggcagcagctcagcgcgccgctggcgttcgac
tttacgctggcggatgacgaaccgctcagtgcctggctgagtggctgcgacgatgaagag
cggcgcgggcaacaggcgctgcagcagcatgaacaatcggcgcaggcggtacagcaggcg
aaagacgcgctcgcggcgctgcaaacgcagcagcagcaggcgcagcaacagttggcgttg
ctcgaagagcgctttacgctgctgcaaaaaaaccacgccgatagcctgcaacagcaacaa
gacctgcaacaacgctggcaagaaggcgagaaaatcctcgccgaacggcgtgcgcagcgg
ctggcgctgttcggcgaacagcgggtcgccgaggtgcgcgaacagctgcgcgccaaacaa
accgcctgcgaacaggccagtgttcaggctgccgagcagtggcaaaaggcgcaggaactg
cgcgaacgcctggcaggccaacaggccgggctgcaacagcaacacgcccaaatgcaggaa
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgaattcgtcgat
gaaaccgccttcgccgccgcgctgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcagttgcagcagcggcaggtagaggccaccgccctgctgacacaggcgacgcaa
acgctggagcagcatcggcagaaccgccctgaagggctggatgaagccaacgcggatatc
gacgcgctcacccaatcgctggccgagctggcgcagcagttgaaggtgctgcagctgcgc
cagggcgaactgcgcaatcagttggaaagcgacgccgcccgccgcctcaatcagcaggcg
ctgttcgagcagatcgcccgcagccagcaagactacgatgactggagctacctcaaccag
ctgatcggctcaaaagaaggcgacaagttccgccgctttgctcaggggctgacgctcgat
catctggtttacctggccaacaaccagctcggccggctgcacggacgttatctgctgcag
cgcaagaccagcgatgcgctggaactgcaggtggtcgacacctggcaggcggatgcgctg
cgcgatacccgcaccctgtccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccataaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggatgcgctggacagcctgaac
gcctccggcaaaaccatcggcgtgatcagccacgtcgaggcgatgaaagagcgtattccg
gtgcagatcaaggtgaagaaggttaacgggcttggcgtcagccggctggaagcgcacttc
aggctggaatga
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integrated database retrieval system
