Serratia surfactantfaciens: ATE40_002825
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Entry
ATE40_002825 CDS
T06779
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_002825
Enzymes [BR:
ssur01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ATE40_002825
DNA repair and recombination proteins [BR:
ssur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ATE40_002825
Prokaryotic type
ATE40_002825
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
SH3_15
Motif
Other DBs
NCBI-ProteinID:
AOE98250
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All DBs
Position
602334..603764
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACSDPEARVLAVFIATPQQWRQHEMAPRQAALIHASLR
AVQQALAQKGIALHCHAGTDFAASIDWLADYCRREQVDALFYNRQYELNERRRDAWLEQQ
LNGRVRCHGFDDSLLLPPGSVQTGGGEMYKVYTPFRNAFIHRLTESDLNCLPAPKTRAGG
ALPAPEAPAAFDYPTADIGDGYPAGEEAALQRLRAFCREQVQDYLRQRDLPALAGTSSLS
PYLAIGVLSPRQCFNRLRAECPQLLEDRESGAFAWLNELIWREFYRHLLVAYPELCRHRP
FIAWTDKVRWCDDAEKLQAWQRGETGYPIVDAAMRQLNATGWMHNRLRMISASFLVKDLL
IDWRAGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFIR
KWLPELADVPDNDIHYPHRWAEKQPCVLNYPLPIVDHKQARLETLAAFEAAKRGES
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcatctggtctggttgcgtaacgatctgcgtatcaccgacaacaaagcgctg
cacgctgcctgcagcgatcccgaagcccgagtgttggcggtgtttatcgccaccccgcag
cagtggcggcaacatgagatggcgccgcggcaggcggcgctgatccatgccagcctgcgg
gcggtgcagcaggcgctggcgcaaaaaggcattgcgttgcattgccatgccggcacggat
tttgccgcttcgatcgactggctggcggactattgccggcgggagcaggtggatgcgctg
ttttacaatcgccagtacgaactgaatgaacggcgacgcgatgcgtggctggagcagcag
ttgaatgggcgggtaaggtgccacggttttgatgacagcctgctgttgccgccgggcagc
gtgcaaaccggcggcggggagatgtacaaggtctatacgccgtttcgcaacgccttcatt
catcgcctgaccgagtccgatctcaactgcttgccggcaccgaaaacccgtgccggtggc
gcgttgcctgcgcctgaggcgccagcggcgttcgattaccctacggcagacatcggggat
ggctatcccgccggcgaggaggccgcgctgcagcggctgcgcgccttttgccgcgagcag
gtgcaggattaccttcgccaacgcgatctgccggccctcgccggtaccagcagcctgtcg
ccctatctggcgatcggcgtgctgtcgccgcgccagtgcttcaaccgcctgcgtgcagaa
tgcccacagctgttggaagatcgcgaaagcggcgccttcgcctggctcaacgagctgatt
tggcgcgagttctaccgccatctgctggtggcctatcccgagctgtgccgccatcggccg
tttatcgcctggacggacaaggtgcgctggtgcgatgacgcggagaaactgcaggcctgg
cagcggggcgagaccggttacccgatcgtcgatgccgccatgcgccagctgaacgccacc
ggctggatgcacaaccggctgcgcatgatcagcgccagtttcctggtgaaggacctgctg
atcgactggcgggccggtgagcgttatttcatgtcgcaattgctggacggcgatctggcg
gccaacaacggcggctggcagtgggcggcttccaccggcaccgacgccgcgccgtatttc
cgcatcttcaacccgacaacgcagggtgaacgttttgatccacaaggcacttttatccgt
aaatggttgccggaactggcggatgtgcccgacaatgacatccattatcctcaccgttgg
gcggaaaagcagccatgcgtgctgaattacccgctgccgatcgtcgatcataagcaagcc
cgtctggagacgctggcggcgttcgaggcggcgaaacggggagagtcttga
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