Serratia surfactantfaciens: ATE40_004055
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Entry
ATE40_004055 CDS
T06779
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssur03000
]
ATE40_004055
Transcription factors [BR:
ssur03000
]
Prokaryotic type
Helix-turn-helix
Other families
ATE40_004055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
HTH_30
AAA_3
AAA
HTH_23
HTH_psq
Xre-like-HTH
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_24
HTH_1
AAA_16
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AOE98475
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Position
complement(839825..841423)
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AA seq
532 aa
AA seq
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MSDHITPPRTPDKPVIWTVSITRLFDLFRDISLEFDHLATITPIRLGFEEAVQHIRARLA
TEPCDAIIAAGSNGAYLKSRLSVPVILVKPGGFDLLQALSKARRTADRIGVITYKTPLPA
LMEFQQTFDLPLEQRSYVTEEDARGQIAELKAAGIQAVVGAGLISDLAEEAGLTAIFLYS
AATLRAAFSDALDVTRLMLGNAKRGDYATRNTLQPRYGLGDLQGDSPQMEQARRTIMLYA
RSPAAVLIEGETGTGKELAAQAIHREYFSRRGAPSRGATPPFVAINCGAIAESLLEAELF
GYEEGAFTGSRRGGRRGLLETANGGTLFLDEIGEMPLHLQTRLLRVLEEKTVTRVGGQQP
VAVDFRVISATHNRLEQAIQLGEFRADLFYRLSALRLQLPPLRTRGDDIAMLAEHFLKQS
LAALDVPLSEPLRTAMSGCYAALSHYAWPGNLRELRNMMERLALMLSTGAAPSGETLQWL
LPELAAPTSPEAPEPPLSAQAALAQCGGDHAAAARLLGISRTTLWRRLKKPN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacatcacgccaccccgcacgccggacaaaccggtgatctggaccgtttcc
atcacccgtctgttcgacctgttcagggatatcagcctcgagttcgaccacctggcgacc
atcaccccgatccgcctcggctttgaggaagcggtgcagcatattcgcgctcgcctggcg
accgagccttgcgacgccatcatcgccgccggctccaacggtgcctacctgaaaagccgc
ctgtcggtgccggtcattttggtcaaacccggcggcttcgatctgctgcaggcgctgagc
aaggcgcgcagaaccgccgatcggatcggcgtcatcacctacaaaacgccgctgcccgcg
ctgatggagttccagcaaaccttcgatctgccgctggagcagcgcagctacgtgaccgaa
gaggacgcccgcggccagatcgccgagctgaaagccgccggcattcaggccgtggtcggc
gcgggcctcatcagcgatctggcggaagaggccgggctcaccgccatttttctctattcc
gctgccaccctgcgcgccgccttcagcgatgcgctggacgtgacgcgcctgatgctgggc
aacgccaaacgcggcgactacgccacgcgcaataccctgcagccgcgctatgggttgggc
gatttgcagggcgactccccgcagatggagcaggcgcggcgcaccatcatgctgtacgcc
cgctcgccggcggcggtgttgatcgaaggagaaaccggcaccggcaaagagctggcggcg
caggcgatccaccgggaatacttttcccggcgcggcgcgccgtccagaggcgcaacaccg
ccgttcgtcgccatcaactgcggcgccatcgccgaatcgctgctggaggcagaactgttc
ggctatgaggaaggcgcctttaccggctcacggcgcggcggccggcgcgggctgctggag
accgccaacggcggcaccctgtttctggatgagatcggcgaaatgccgctgcatctgcag
acccggctgctgcgcgtgctggaagagaaaaccgtcacccgggtcggcgggcaacagccg
gtggcggtcgattttcgcgtcatcagcgccactcacaaccggctggaacaggcgattcag
ctgggcgaatttcgtgcagacctgttctaccgcctgagcgccctgcggctgcagctgccg
ccactgcggacgcgcggcgacgatatcgcgatgctggcggaacactttctgaaacagtcg
ctggcggcgctcgacgtgccgctgagcgagccgctgcgcaccgccatgtccggctgttac
gccgcgctcagtcactacgcctggcccggcaacctgcgcgagctgcgcaacatgatggaa
cggttggcgctgatgctgagcaccggcgccgcgccaagcggtgaaacgctgcagtggctg
ctgccggaactggcggcgccaacctcgcccgaggcgccagagccgcccctttccgcccaa
gcagcgctggcgcaatgcggcggcgaccacgccgccgccgcccgattgctcgggatcagc
cgcaccactttatggcgtcggctgaaaaaaccgaactga
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