Serratia surfactantfaciens: ATE40_006650
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Entry
ATE40_006650 CDS
T06779
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur00541
Biosynthesis of various nucleotide sugars
ssur01100
Metabolic pathways
ssur01250
Biosynthesis of nucleotide sugars
Module
ssur_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ATE40_006650
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssur01005
]
ATE40_006650
Enzymes [BR:
ssur01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
ATE40_006650
Lipopolysaccharide biosynthesis proteins [BR:
ssur01005
]
Lipid A
ATE40_006650
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
AOF02204
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Position
1397944..1398798
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AA seq
284 aa
AA seq
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MKQKVVSIGDIDVANDLPFVLFGGMNVLESRDLAMSICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFEELKKTFGVKIITDVHEAAQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGINVMKNVTGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGLAGLFLEA
HPDPNNAKCDGPSALPLDKLEPFLAQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtggttagcattggcgacatcgacgtagcaaacgacctgccgtttgtg
ctgtttggcggtatgaacgtgctggaatcgcgcgatctggcgatgagcatctgcgagcac
tacgtcaccgtgacgcaaaaactgggcattccttacgtattcaaagcctctttcgacaag
gccaaccgttcttccattcactcgtaccgcggtccgggcctggaagaagggatgaagatc
ttcgaagaactgaaaaaaaccttcggcgtgaaaatcatcaccgacgtgcacgaagcggcg
caggcgcagccggtttccgaggtggttgacgtgatccagctgccggccttcctggcgcgt
cagaccgatctggtggaagcgatggcgaaaaccggcgcggtgatcaacgtcaagaagccg
cagttcgtcagcccggggcagatgggcaatatcgtcgacaagttcaaagaaggcggcaac
gatcaggtgatcctgtgcgatcgcggcagcaactttggctatgacaacctggtggtcgac
atgctcggcatcaacgtgatgaagaacgtgacaggcggccatccggtgatcttcgacgtg
acccacgcattgcagactcgcgatccgttcggcgccgcgtccggcggccgtcgtgctcag
gtggccgagctggcgcgcgccggtatggcggtcggcctggcagggctgttcctcgaagcg
cacccggatccgaacaacgccaagtgcgacggcccgtccgcgctgccgttggacaagctg
gaaccgttcctggcgcagatgaaagccatcgacgacctggtgaagagcttcccggagctg
gataccagcaactaa
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