Serratia surfactantfaciens: ATE40_009845
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Entry
ATE40_009845 CDS
T06779
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssur03016
]
ATE40_009845
Enzymes [BR:
ssur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ATE40_009845
Transfer RNA biogenesis [BR:
ssur03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ATE40_009845
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
AOE99531
LinkDB
All DBs
Position
2082848..2084782
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRI
IAALHTEKEREIAEPETLVEPFLSRFVGRVQKRDDRLSIVPDHPLLKDAIPCRPVRELAH
NFQAGDWAVAEMRRHPLKGDRGFNADLTRFITEGEDHFAPWWVTLARHNLEKEAPEMLAL
SEPNAALAREDLTALEFVTIDSASTEDMDDALYVTDNGDGSLQLTIAIADPTAYVEQGSK
LDEIARVRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRQVLACRVTIAADGALGDDIQF
FAAEIESKAKLVYDEVSDWLEGIAGWQPPSDAIAQQVTLLKRVCDARNAWRHQHALVFKD
RPDYRFVLGEKGDVLEIVTEQRRSANRIVEECMIAANVCAAIVLRDRLGFGVYNVHTGFD
PALVEQAVTVLQANGVEAEAEKLLTLDGFCELRRHLDAQPTQFLDSRIRRFQTFAEISTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIINQQPAEKPQDDVTVQLAERRRLNRM
AERDVGDWLYARFLQDKAGTDTRFNAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MQCSQETGTVQIKGEVVYRQSDTLQVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcactctcagaccccg
cgcgttgaaggcgtcgtgaaagggactgagaaaggctttggctttcttgaagtagacggt
caaaaaagctacttcattccgccgccgtacatgaagaaagtcatgcacggggatcgcatt
atcgccgccctgcacaccgagaaagaacgtgaaatcgccgagccggaaaccctggtcgag
ccattcctctcgcgcttcgtcggccgcgtgcaaaagcgcgacgatcgcctgtccatcgtg
cccgatcatccgttgctgaaagatgcgattccgtgccgcccggtgcgtgaactggcccac
aacttccaggccggcgactgggcggtggcggaaatgcgccgtcatccgctgaaaggcgat
cgcggcttcaacgccgatctgacccgtttcatcaccgagggtgaagaccatttcgcccca
tggtgggtgacgctggcgcgccacaatctggagaaagaggcgccggaaatgctggccctc
agcgagccgaacgccgcgctggcccgtgaggacctgaccgcgctcgaattcgttaccatc
gacagcgccagcaccgaagacatggacgatgcgctgtacgtgaccgacaacggcgacggt
tcgctgcagctgaccatcgccatcgccgatccgaccgcctacgttgaacaaggcagcaag
ctggatgagatcgcccgcgtgcgcgccttcaccaactacctgccgggcttcaacatcccg
atgctgccgcgcgacctgtcggacaacctgtgctcgctgcgccctaacgagcgccgccag
gtgctggcctgccgcgtgaccatcgccgccgacggcgcgctgggcgacgatattcagttc
ttcgccgccgagatcgaatccaaagccaagctggtgtacgacgaagtctccgactggctg
gaaggcattgccggctggcagccgccgagcgacgccatcgcgcaacaggttaccctgctg
aaacgcgtttgcgacgcacgcaacgcctggcgccaccagcacgcgctggtgttcaaagat
cgcccggactaccgcttcgtgctgggtgaaaaaggcgacgtgctggagatcgtcaccgag
cagcgccgcagcgccaaccgcatcgttgaagaatgcatgatcgccgccaacgtctgcgcc
gccatcgtgctgcgcgatcgcctgggcttcggcgtgtacaacgtgcacaccggtttcgat
cctgcgctggtcgagcaagcggtcaccgtgctgcaggccaacggcgtggaagccgaagcc
gagaagctgctgaccctcgacggtttctgcgaactgcgccgccatctggatgcgcagccg
acccagttcctcgacagccgcatccgccgcttccagaccttcgccgagatcagcaccacg
ccggggccgcacttcggtctggggctggaggcttacgcgacctggacatcgccaatccgt
aaatacggcgacatggtcaaccatcgtctgctgaaggcgatcatcaaccagcagccggcg
gaaaaaccgcaggatgacgtgacggtgcagctggcggaacgccgccgcctgaaccgcatg
gcggaacgcgacgtcggcgactggctgtacgcccgcttcctgcaggacaaggccggtacc
gatacccgtttcaacgccgagatcatcgacgtgacccgcggcggcctgcgcgtacgtctg
ctggacaacggcgcggttgcctttatcccggcgccgtttattcacgcggtgcgtgacgaa
atgcaatgcagccaggaaaccggcaccgtgcagatcaaaggtgaagtggtttaccgccag
agcgacaccttgcaggtcaccatcgccgaagtgcgcatggaaacccgcagcgtgatcgcc
cgccctgcggcctga
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