Serratia surfactantfaciens: ATE40_010720
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Entry
ATE40_010720 CDS
T06779
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssur03009
]
ATE40_010720
Enzymes [BR:
ssur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ATE40_010720
Ribosome biogenesis [BR:
ssur03009
]
Prokaryotic type
rRNA helicases
ATE40_010720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
AAA_19
Ebola-like_HR1-HR2
Motif
Other DBs
NCBI-ProteinID:
AOE99695
LinkDB
All DBs
Position
complement(2272886..2274268)
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AA seq
460 aa
AA seq
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MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILQGRDVRAKAKTGSGKTAAFGI
GLLNSIVVGQVATQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRIQEHLRKKTLQLDELKMLVLDEADRMLDMGFADDIDDVISYTPPQRQ
TLLFSATYPAGIERISERVQRQPLSVEVDDGEAQTSIEQRFYETTRDQRPALLVSAIRHH
QPASCVVFCNTKRDCQTVLEALEARNISALALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGLSGLAVSLCTPQEMARAHAIEDY
LQMSVDWAPVSELSGAASGSLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRKASARKALQQLQQGKIKGKSCKVRLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagtttctttttcttccctgccgctgccagccgaacagttggccaacctcaac
gaactggggtacgccgaaatgacgccggtgcaggccgccgcgttgcccgccatcctgcaa
gggcgggacgtgcgcgccaaggcgaaaaccggcagcggtaaaacggcggcgttcggcatt
ggcctgctgaacagcatcgtcgtcggtcaggtcgccacacaggcgctggtgctttgcccg
acccgcgagctggccgatcaggtcagcaaagagctgcgccgcctggcgcgtttcacgcag
aacatcaagatcctgacgctgtgcggcggccagccgatggggccacagctcgattcgctg
gtgcatgcgccacacatcgtggtggggacgccgggccgtatccaggagcacctgcgcaag
aaaacgctgcagttggacgagctgaaaatgctggtgctggatgaggccgatcgcatgctg
gacatggggtttgccgacgatatcgacgatgttatcagctacacgccgccgcagcgccag
acgttgctgttctccgccacttatccggcgggcatcgagcgcatcagcgagcgcgttcag
cgccagccgctgagcgtcgaggtggacgatggcgaagcgcagacttccatcgaacaacgc
ttctatgagactacccgcgatcagcgcccggcgctgctggtgtcggcgattcgccatcat
caacccgcgtcctgcgtggtgttctgcaataccaagcgcgattgccagacggtgcttgaa
gccctggaggcccgcaacatcagcgcactggcgctgcatggcgatctggagcagcgcgat
cgcgatcaggtgttggtacgtttcgccaaccgcagttgccgggtgttggtggcgaccgac
gtcgccgctcgcggcctggatatcaaagagctggagctggtggttaactacgagctggcg
ttcgatcccgaagtgcatgtgcaccgcattggccgcaccggccgcgccggcctgagcgga
ctggcggtcagcctgtgcacgccgcaggaaatggcgcgggcgcacgcgattgaagattat
ctgcagatgagcgtcgattgggcaccggtgtccgagctgagcggggcggcgagcggttcg
ctggaagcggagatggtgacgctatgcatcgacggcggccgtaaggcgaaaatccgtccc
ggcgatatccttggcgcgttgaccggcgacgccgggctgacggcggcggaagtgggcaag
atcgacatgttcccggtgcacgcctatgtcgctattcgcaaggccagcgcgcgcaaggcg
ctgcaacagctgcagcagggtaaaatcaaaggcaaaagctgcaaggtacggctgctgaaa
taa
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