Serratia surfactantfaciens: ATE40_011260
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Entry
ATE40_011260 CDS
T06779
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur02020
Two-component system
ssur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ATE40_011260
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ATE40_011260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssur03021
]
ATE40_011260
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ssur02035
]
ATE40_011260
Transcription machinery [BR:
ssur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATE40_011260
Bacterial motility proteins [BR:
ssur02035
]
Flagellar system
Flagellar assembly proteins
Stator
ATE40_011260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
HTH_23
UPF0122
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AOE99799
LinkDB
All DBs
Position
complement(2392163..2392885)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWLRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRHAREVAQVMRQLEQRYGRPASETEV
AQTLNISLDEYRQILLDTNNSQLFSYDEWREEHGENAEPMLEGHEEANPLHHLLEGSLRQ
RVIDAIEALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLANDT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgtataccgccgaaggcgtgatggacaaaaattctctctggctgcgctac
gtcccgttagtgcgccacgaggcgttgcgcctgcaggtcaggctgcccgccagcgtggag
ctcgacgatttgctgcaggccgggggaatcgggttattgaacgccgttgagcgttatgac
gccctacagggaaccgcctttaccacctatgcggtgcagcgcattcgcggcgcgatgctc
gacgagctgcgcagccgcgactgggtgccgcgcagcgtgcggcgccatgcgcgcgaggtc
gcacaggtgatgcggcaactggaacagcgttatggccgtccggcgagcgagacggaagtg
gcgcagacgctgaatatctcgctggatgagtaccgtcaaattctgttggacaccaataac
agccagcttttctcctacgacgaatggcgcgaggagcatggcgagaacgcggaaccgatg
ctggaagggcatgaagaggccaacccgctgcatcacctgttggaaggcagcctgcgccag
cgagtgatcgacgccatcgaggcgttgccggagcgcgaaaaaatggtgctgacgctgtat
taccaggaagagttgaacctcaaggagatcggcgccgtgctggacgtcggggaatcccgc
gtcagccaactgcacagtcaggcgatcaaacggctgcgcgcgcggctggcgaacgatacc
tga
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