Serratia surfactantfaciens: ATE40_013520
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Entry
ATE40_013520 CDS
T06779
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssur03032
]
ATE40_013520
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_013520
Enzymes [BR:
ssur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ATE40_013520
DNA replication proteins [BR:
ssur03032
]
Prokaryotic type
DNA Topoisomerases
ATE40_013520
DNA repair and recombination proteins [BR:
ssur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATE40_013520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AOF00220
LinkDB
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Position
complement(2877669..2880311)
Genome browser
AA seq
880 aa
AA seq
DB search
MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILESPERLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGFGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEAAEEDSTPLDDGDDAAEPMDDDNV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttgaaaaactcg
tatctggactacgcgatgtccgttattgtcggacgcgcgctgccagatgttcgtgatggt
ctgaagccggttcaccgccgcgttctgtacgcgatgagcgtactgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaatatcacccacac
ggtgacagcgcggtttacgacactatcgtgcgtatggctcagccgttttcactgcgctac
atgctggtggacggtcagggtaacttcggttccgtcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtccaagattgctcacgaactgttggcggatctggaaaaa
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgtcatgccg
accaagatcccgaacctgctggtcaacggctcgtcgggcatcgccgtgggtatggccacc
aatattccaccgcacaacctggctgaagtcgtcaacggctgcctggcctatatcgatgat
gaaaacatcagcatcgaagggctgatggaacacattccggggccggacttcccgacggcg
gcgattatcaacggccgtcgcggcattgaagaggcctaccgcaccgggcgcggcaaagtc
tacctgcgcgcgcgcgcggaagtggaagccgacgccaagaccggccgcgaaaccatcatc
gttcacgagatcccgtatcaggtgaacaaggcgcgtctgatcgagaagatcgccgagctg
gtgaaagagaaacgcgtcgaaggcatcagcgcgctgcgcgacgagtccgataaagacggc
atgcgtatcgtgatcgaagtcaaacgcgacgcggtcggcgaggtggtgctgaacaacctg
tatgcgctgacgcaactgcaggtcaccttcggcatcaacatggtggcattgcatcagggc
cagcctaagctgctgaacctgaaagacatcctcgaagccttcgtgcgccaccgccgcgaa
gtggttacccgccgcaccatcttcgaactgcgtaaggcccgcgaccgcgcccatatcctg
gaagcgttggccatcgcgttggccaacatcgatccgatcatcgagttgattcgccgtgcg
ccgacgccggcggaagcaaaagtcgcgttggtggcgcagccgtgggatctgggcaacgtc
agcgccatgctggagcgcgccggtgacgacgccgcccgccctgagtggctggagccggag
ttcggtatccgcgacggcaagtactacctgaccgagcagcaggctcaggcgattctggat
ctgcgtctgcagaaactgaccggtctggagcatgaaaagctgctggacgaatacaaagag
ctgctcaactttatcgccgagctgatcttcattctggaaagcccagaacgtctgatggaa
gtgatccgcgaagagctggtggcggtcaaagagctgtacaacgacggccgtcgcaccgag
atcaccgccaatacttccgacatcaacatcgaagacctgatcaaccaggaagatgtggtg
gtgaccctgtctcaccagggttacgtgaagtatcagccgctgtccgactatgaagctcag
cgccgcggcggcaaaggcaagtccgccgcgcgtattaaagaagaagactttatcgatcgc
ctgctggtggccaatacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtatcaactgcctgaagccagccgtggcgcgcgcggtcgcccaatcgtc
aacctgctgccgctggaagccgatgagcgtatcaccgccatcctgccggtgcgcgagtat
gaagaagggcgtcacgtgttcatggctaccgccagtggtaccgtgaagaaaaccgcgctg
accgagttcagccgtccgcgcagcgccggcatcatcgccgtcaacctcaacgagggcgac
gagctgatcggtgtcgatctgaccgacggcagcaacgaagtgatgctgttctccgccaac
ggtaaagtggtgcgcttcccggaaacgcaggttcgttcgatgggccgtaccgccaccggc
gtgcgcggcatcaacctcggcgaaggcgacagcgtgatctccctgatcgtgccgcgcggc
gaaggcgatatcctgaccgtcacgcaaaacggcttcggtaaacgtaccgccgtgaccgaa
tacccgaccaagtcacgcgccacccagggggttatctccatcaaggtgagcgagcgtaac
ggtcaggtggtcggcgccgtgcaggtggaaaccagcgaccagatcatgatgatcaccgat
gccggcacgctggtgcgtacccgcgtttcggaagtcagcgtggtgggccgtaacacccag
ggcgtgacgttgatccgcacggcggaagacgaaaacgtcgtcggcctgcagcgcgtggcc
gagccggtggaagacgaagagctggacagcctggagccgggcgcggaagcggcggaagaa
gacagcacgccgctggacgatggcgacgacgcggctgagccgatggacgacgacaacgtt
taa
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