Serratia surfactantfaciens: ATE40_013870
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Entry
ATE40_013870 CDS
T06779
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssur03016
]
ATE40_013870 (truA)
Enzymes [BR:
ssur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ATE40_013870 (truA)
Transfer RNA biogenesis [BR:
ssur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATE40_013870 (truA)
Prokaryotic type
ATE40_013870 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AOF00288
LinkDB
All DBs
Position
complement(2955328..2956149)
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AA seq
273 aa
AA seq
DB search
MSEVVSSAQPTLKIALGIEYDGSRYYGWQRQQEVASVQERLEQALSKVADAPINVLCAGR
TDAGVHATGQVVHFETTARRKDAAWTMGVNTHLPPDIAVRWVSPVADDFHARFSATARRY
RYIIFNHRYRPAVLQQGVTHFYHPLDADRMHRAAQALLGENDFTSFRAVQCQSRTPWRFV
KHVKVTRYGEYIVVDIKANAFVHHMVRNIVGSLMEIGCGNQDENWMAELLALKDRNLAAA
TARAEGLYLVSVDYPDHFGIPRPPMGPLFLPDD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtggtctcgtccgctcagccgacgctgaagatcgcgctgggcatcgaatat
gacggcagccgttattacggctggcagcggcagcaagaagtggccagcgtgcaggagcgg
ctggagcaggcgttgagcaaggtggcggatgcgccgatcaacgtgctgtgcgccgggcgc
accgacgccggcgtgcacgccaccgggcaggtggtgcatttcgaaactaccgcgcgccgc
aaggacgccgcctggacgatgggggtgaacacccatctgccgccggacatcgcggtgcgc
tgggtgagcccggtcgccgacgattttcacgcgcgtttcagcgccaccgcgcgccgttac
cgctatattattttcaaccatcgctaccggccggcggtgctgcagcagggggtgacgcat
ttttatcacccgctggacgccgatcgcatgcaccgggcggcgcaggcgctgctgggcgag
aacgatttcacctcgttccgtgcggtgcaatgccagtcgcgtaccccgtggcgcttcgta
aaacacgttaaggttacgcgctacggcgaatatattgtggtagatatcaaggcgaatgcc
tttgtgcatcacatggttcgcaatatcgtcggcagcctgatggagatcggctgcggcaat
caggatgagaactggatggccgaattgctggcgctgaaggatcgcaatctggcggcggcg
acggcacgagccgagggactgtatctggtttccgtggactatcccgaccactttggcata
ccgcggccgccgatggggccgctgtttttacccgacgattaa
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