Serratia surfactantfaciens: ATE40_014210
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Entry
ATE40_014210 CDS
T06779
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ssur
Serratia surfactantfaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_15
TPR_19
TPR_2
Motif
Other DBs
NCBI-ProteinID:
AOF02288
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All DBs
Position
complement(3022737..3025031)
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AA seq
764 aa
AA seq
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MLAYLSQRRAREGLSLQQRADYIQVAGWAGHDEEVVALWRADGAALQRDSASLATAARAY
RNLKQWQPSLRLWRAALQLAPADGGLQRGYVMTLADAGQDVQAQTEAAKAEKLLEPATWY
LTRAYVDQTAGRSWAALENVTHARALTPSDTGIQAYYVTLLAANRVADPALRESQGLTLP
PVQQRRLQADEAAELVRLSFIDARGEQERFVIADRALARYDQLLTQWRPLPEAQDSYQQA
RIDRLGALLARYRMADVVSEYQTLQAEGRTVPDYAQRWAASAYLYLQQPDKAQAIFGRLN
AAAPQAVTAEDETDLFYAQAENERIDQAALLAQRVSQRYPYATRLYQLPTLAYNDDWLVG
QSLLAQSRVYQRDLAEAERQLTHLARTAPGNQGLRISLASVYLARGWPRRAEEELKQVEG
LEPRSLPLEIQQGYVAQELQAWRQLDLLADDVIQRAPESVAAQQLERSRRIHHMSELRIS
GNQGIDSDGPVSGSHDFGIHAALYSPPIDDNWRLFTGWGFNTGQFEEGKGINRDLSAGAE
WRSRDLWLEAEVANRNYGHGNELGLRLSSWYDLNDQWRLGGSVARLSAETPLRALTNGIS
ANGGNLWLRWQQNESRELRASVAPSHFSDGNNRLEYGLEGRQRLLAGARYRLDMNLTLSG
SRNSQENVPYYNPKRDFTLLPSLTLDHTLYRHYQTEWSQQFQAGAGSYWQRDYARKPITQ
LGYGQRISWNGVLDAGAMLQFEKHPYDGKRERNIGVTFDLNYRF
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcgtatttatcgcagcggcgcgctcgggaggggttgagcctgcagcagcgagcc
gattatatccaggtggccggctgggccggccacgatgaagaggtggtcgcgctttggcgt
gccgacggcgccgcgctgcagcgggatagcgccagtctggcgacggcggcccgcgcctat
cgcaacctgaagcagtggcaaccgtcgctgcgcctgtggcgtgcggcgttgcagctcgct
cccgccgacggcggtctgcagcgcggctatgtgatgacgctggcggatgccgggcaggat
gtgcaggcgcaaacggaagcagcaaaagcggagaagctgctggagccggcaacgtggtat
ctgacgcgcgcctatgtggaccagaccgccggccgcagctgggcggcgctggaaaacgtt
acccatgcccgtgcgctgacgccgtccgacaccggaattcaggcttattacgtgacgctg
ctggcggcgaatcgggttgcggatccggcactgcgtgaaagccaggggctgacattgccg
cccgtgcagcagcggcgcctgcaggcggatgaagccgccgagctggtgcggttgtcgttt
atcgatgctcgcggcgaacaggaacgtttcgtcatcgccgatcgcgcgctggcgcgctat
gaccaactgctgacgcagtggcggccgctgccggaggcgcaggacagctatcaacaggcg
cgtatcgatcgccttggcgcgctgctggcgcgttatcgaatggccgacgtggtgagcgag
tatcaaaccctgcaggcggaagggcgcacggtgccggattatgcccagcgctgggcggcg
tccgcctacctctatctgcagcagccggacaaggcgcaggccattttcggccgcctgaac
gccgccgcaccgcaggcggtgaccgccgaagacgaaaccgatctgttttacgcgcaggcg
gagaacgaacgcatcgatcaggcggcgctgctggcgcagcgcgtcagccagcgctatccc
tacgcgacccgcctgtaccagctgccgacgctggcctacaacgatgactggctggtcggc
caatcgctgttggcgcagtcgcgggtttatcaacgcgatctggccgaggccgaacggcag
ctgacccatctggcgcgcacggcgccgggcaatcagggtctgcgcatctccttggccagc
gtttatttggcgcgcggctggccgcgccgcgcggaggaggagctgaagcaggtggaaggg
ctggagccgcgcagcctgccgttggagatccagcagggctatgtcgctcaggagttgcag
gcgtggcggcagctcgatttgctggccgacgatgtcatccagcgcgcgccggaaagcgtc
gccgctcagcagctcgagcgttcgcgccgcattcaccacatgtctgaactgcgcatcagc
ggcaatcagggcatcgattcagacgggccggtcagcggcagccacgatttcggcattcac
gccgcgctctattcaccgccgatcgacgacaactggcggctgttcaccggctggggattc
aacaccggccagttcgaggagggcaagggcatcaatcgcgatctcagcgccggcgccgag
tggcgctcgcgcgatctgtggctggaggccgaggtggccaaccgcaactacggccacggc
aatgagctcggcctgcgtctctcatcctggtatgacctgaatgatcaatggcgcctcggc
ggttcggtggcgcggctgtcggccgagacgccgctgcgtgcgttgaccaacggcatcagc
gccaacggcggtaacctgtggctgcgttggcagcagaacgaaagccgcgagctgcgtgcc
agcgtggcgccttcgcacttctcggacggcaacaaccggctggaatacggcctagaaggg
cggcaacggctgctcgccggcgcccgctatcggctggacatgaacctgacgctgtccggc
agtcgcaacagccaggagaacgtgccgtattacaacccgaagcgcgacttcacgctgctg
ccgtcgttaacgctcgatcacactctgtatcgccattatcagaccgagtggagccagcag
ttccaggccggtgccggcagctattggcagcgggactatgcgcgcaagccgatcacccag
ttgggttacggccagcgcatcagctggaacggggtgttggacgccggcgcgatgctgcag
tttgagaagcatccgtacgacggcaaacgcgagcggaacatcggcgtgacgtttgatctg
aattatcgtttttaa
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