Serratia surfactantfaciens: ATE40_014915
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Entry
ATE40_014915 CDS
T06779
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATE40_014915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssur03000
]
ATE40_014915
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_014915
Enzymes [BR:
ssur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ATE40_014915
Transcription factors [BR:
ssur03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ATE40_014915
DNA repair and recombination proteins [BR:
ssur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATE40_014915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
DUF1952
Motif
Other DBs
NCBI-ProteinID:
AOF00481
LinkDB
All DBs
Position
complement(3167005..3168495)
Genome browser
AA seq
496 aa
AA seq
DB search
MQKKPNPSVAMNTQQQALYDALRARDRKFDGRFFVGVSSTGIYCRPVCSARTPKRENCTF
YPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCEALAARL
GISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLADTDLPLSEVAFAAGFGSLRRFNEL
FKARYRLIPSALRSGGARGERAAASGLVFHLGYRPPYDWDRMLNFLQARAVQGVERVAGR
RYLRSIAVSQGGTEHRGWVSVQPEEERNRVRVEIAPALSLVTTEVLRRVRLLFDLDAAPD
RINEALGSLAADAPGLRLPGCVNSFEQAVRAVLGQLVSVKMAATFAGRMAERWGEALDTP
HEGITHVFPSAERVAQLQPEALRPLGVQLKRAAALIEIARALGEGRLQLDNVLDIEQGIK
ALTALPGIGGWTASYIAMRAWSWPDVFLAGDYLIKQRFPGMTPRQIERYAERWRPWRSYA
TLHLWHNDAWAPEGER
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaaccgaacccgagcgttgccatgaatactcaacagcaagcgttgtacgac
gcgctgcgcgcgcgtgaccgaaaattcgacggccgcttttttgtcggcgtttcctccacc
ggcatttattgccgcccggtgtgcagcgcccgcacaccgaagagggaaaactgcaccttt
tatccgagcgcggccgcggccgagctggcggggtttcgcccctgccttaaatgccggcca
gagctggcgcccggcctggcgctgatcgatctgggcaaccgttatgcgcaggtggcggta
cagctcatcgagcagggctatttgtccgagcacagttgcgaagcgctggcggcgcggctg
ggtatttccgatcgccacctgcggcgcatcttcgccgaacagtttggcgcttcgccgatc
gattacgcccagtcgcaccggctgctgcaggccaaacgcctgttggcggataccgacctg
ccgctcagcgaagtggcgttcgccgccggtttcggcagcctgcggcgtttcaatgagctg
ttcaaggcgcgctatcgcctgattccgtcggcgctgcgcagcggcggcgcgcgcggtgaa
cgggccgccgccagcgggctggtgtttcacctgggttatcggccgccctatgattgggat
cgcatgctgaacttcttgcaggcgcgcgccgtgcagggcgtggaacgagtagcagggcgc
cgctatctgcgctcgatcgccgtcagccagggcggcacggaacaccgcggttgggtcagc
gtgcagccggaagaagaacgcaaccgggtcagggtcgagatcgcgccggcgctcagtttg
gtgacgacggaggtgctgcgccgcgtgcgcttgctgttcgacctggacgccgcgccggac
cgcatcaatgaggcgctgggctcgctggcggccgatgcgccggggctgcgtctgccgggc
tgcgtgaacagtttcgagcaggcggtgcgtgcggtgctgggacaattggtcagcgtgaaa
atggcggcgaccttcgccggacgaatggccgagcgttggggagaagccctggacacgccg
catgagggcatcacccatgtcttcccttccgccgaacgggtggcgcagctgcagcccgaa
gcgctgcgtccgctcggcgtacagttaaagcgtgcggcggcgctgatcgagatcgctcgg
gcgttgggcgaagggcggttgcagctcgataacgtgctggatattgaacagggcatcaag
gcgttgaccgcgttgccgggcatcggcggctggaccgccagctatatcgcgatgcgcgcc
tggtcgtggcctgacgtgttcctggccggtgactacctgatcaaacagcgtttccccggc
atgacgccgcgccagattgaacgttacgccgaacgctggcgcccgtggcgttcttacgcc
acgctgcatctgtggcacaacgacgcatgggcgccggaaggggagcgctga
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