Serratia surfactantfaciens: ATE40_015200
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Entry
ATE40_015200 CDS
T06779
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssur03009
]
ATE40_015200
Ribosome biogenesis [BR:
ssur03009
]
Prokaryotic type
GTPases
ATE40_015200
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
AAA_22
Roc
Ras
ABC_tran
AAA_24
SRPRB
ATP_bind_1
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
AOF00535
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Position
complement(3228614..3230104)
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AA seq
496 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI
DGTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSRQKATFLVANKT
DGLDPDTATADFYSLGLGEVFAIAASHGRGVTQLIEHVLVPFVPEKPEDVELTEEEANAA
YWAEQNGETLEGEEDEEPEEEFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMP
GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDA
REGISDQDLSLLGFILNSGRSLVIAVNKWDGMSEEDREHVKEMLDLRLGFVDFARVHFIS
ALHGSGVGNLFESVQEAYECATRRVNTSMLTKIMQMAVDDHQPPLVRGRRVKLKYAHAGG
YNPPIVVIHGNQVSDLADSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFAGKRNLLTPT
QMRKRKRLMSHLKKSK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgtcgcgctggtcgggcgcccgaatgtgggtaaatccaccttgttcaac
cgtttaacccatacgcgcgatgcgctggtggcggatttcccggggctgacgcgtgaccgc
aagtatggtcgtgctgaaatcgaaggcaatgaattcatcatcgtcgataccggcggtatc
gacggcaccgaagacggcgtagaaacgcgcatggccggtcagtcgctgctggcgatcgaa
gaagcggacatcgtgctgttcatggtcgacgcccgcgccggcctgatgccggcggatcag
ggcattgcccagcacctgcgcagccgccagaaggcgaccttcctggtagccaacaaaacc
gacggtctggatccggacaccgccaccgctgatttctattcgctcggcctgggtgaagtg
ttcgctatcgccgcttctcacggccgcggcgtgacccagctgatcgaacacgtgctggtg
ccgttcgtgccggaaaaaccggaagacgtcgagctgaccgaggaagaggccaacgccgct
tactgggccgagcaaaacggtgaaacgctggaaggcgaagaagacgaagagccggaagaa
gagttcaatccgcaggatctgccgatcaagctggcgatcgtcggccgcccgaacgtaggt
aagtctacgctcactaaccgcatcctcggcgaggagcgcgtggtggtgtacgacatgccg
ggcaccacccgcgacagcatctatattccgatggtgcgcgacgaacgtgaatacgtgctg
atcgacaccgccggggtgcgtaaacgcggcaaggtgacggaaaccgtcgagaaattctcg
gtgatcaagaccctgcaggcgattgaagacgccaacgtggtgctgctggtgatcgacgcg
cgtgaaggcatttccgatcaggatctctcgctgctcggctttatcctcaatagtgggcgc
tcactggtgattgcggtcaacaagtgggacggcatgagcgaagaagatcgcgagcacgtg
aaagagatgctcgatctgcgtctgggcttcgtcgacttcgcgcgcgtgcacttcatttcc
gcgctgcacggcagcggcgtcggcaacctgttcgaatcggtacaggaagcctacgagtgc
gcaacccgtcgcgtaaacacctcgatgctgaccaaaatcatgcagatggcggttgacgat
catcagccgccgttggtgcgcggccgccgtgtgaagctgaaatacgcccacgccggcggt
tacaacccgccgatcgtggtgatccacggcaaccaggtcagcgatctggccgattcctac
aagcgctatctgatgaactacttccgccgctcgctgaacgtgatggggacgccgatccgc
atccagttcaaagagggtgacaacccgttcgccggcaaacgcaacctgctgacgccgacc
cagatgcgcaagcgcaagcgcctgatgagccacctgaaaaagagcaagtaa
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