Serratia surfactantfaciens: ATE40_017465
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Entry
ATE40_017465 CDS
T06779
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur00330
Arginine and proline metabolism
ssur00480
Glutathione metabolism
ssur01100
Metabolic pathways
ssur01110
Biosynthesis of secondary metabolites
ssur04148
Efferocytosis
Module
ssur_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ATE40_017465
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ATE40_017465
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ATE40_017465
Enzymes [BR:
ssur01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ATE40_017465
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AOF02327
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Position
complement(3715013..3717178)
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AA seq
721 aa
AA seq
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MKELKIATSASLVATIETLRQIVRVEQTDYTDVAAVVVSVADVNAGILARLQATGFDIPT
FVAVEGDEHLSPDYLPFVSGVFALLAGASKPFYMAQLEAAADAYEQALLPPFFKTLKTYV
EMENSTFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGSAKDA
QKHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATP
VYLETARNPFGFIGGIDAHCFDERYLREQIREVAPEKAAAARPFRLAIIQLGTYDGTIYN
ARQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAG
FSQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGPAGRR
MWMDCVKLGIETRKQLLKRCSQLKPFIPQQVAGKDWQDHDTDLIANDARFFTFVPGETWH
GFEGYAQDQYLVDPCKLLLTTPGIDATTGQYTAFGVPATILANFLRENGIVPEKCDLNSI
LFLLTPAENPAKMEQLVDMLAQFERYVEEDAPLSVVLPTVYRKNEQRYRGYSIRRLCQEM
HDLYVSFDVKQLQKEMFRQDHFPPVVMNPQDANVEFIRDNVELVPIGQAAGRIAAEGALP
YPPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIK
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatcgcgaccagcgccagcctggtcgccaccattgagacgctgcgc
cagatcgtgcgcgtagagcagacggattacaccgacgtggcggcggtggtggtgtcggtc
gccgacgtgaacgccggcattctggcgcgcttgcaggcgacggggttcgacattccgacc
ttcgtggcggtggaaggggacgagcatctttccccggactatctgccgttcgtcagtggg
gtgttcgcgctgctggccggcgccagcaagccgttctacatggcgcagctggaggccgct
gccgatgcctatgagcaggcgctgctgccgccgttcttcaaaacgctgaagacctacgtc
gagatggaaaattctacctttgcatgcccggggcaccagggcggcgagtttttccgcaag
cacccggccggccggcagtttttcgatttctacggtgaaacccttttccgttccgacatg
tgcaacgctgacgtcaagctgggcgatctgctgatccatgaaggctcggccaaagatgcg
cagaagcacgcggcgcgggtgttcaacgccgataaaacctacttcgtgctcaacggcacc
tcggcggccaacaaagtggtgaccaatgcgctgctgacccgcggcgatctggtgctgttc
gatcgcaacaaccataaatccaaccaccacggggcgctgatccaggccggtgctacgccg
gtctatctggaaaccgcccgcaacccgttcggttttatcggcggcatcgatgcgcactgc
ttcgacgaacgttacctgcgcgagcagatccgcgaagtggcgccggagaaggctgcggca
gcgcggccgttccggctggctatcattcagctcggcacctacgacggcacgatttacaac
gctcgccaggtgatcgacaccatcggccacctgtgcgattacattctgttcgactccgcc
tgggtgggctacgagggttttattccgatgctgaaagagtgctcgccgctgctgctggag
ctggacgagcacgatccgggcatcttcgtcactcagtcggtgcataagcagcaggcgggg
ttctcgcagacgtcgcagatccataagaaagacgaccatatcaaagggcaaaagcgccac
tgcaaccataagcatctgaacaatgcgtttatgctgcatgcgtcgaccagtccgttctat
ccgctgttcgccgcgctggacgtcaacgccaagatgcacgccggccccgccgggcgccgc
atgtggatggactgcgtcaagctgggcatcgagacgcgcaaacagctgctcaagcgctgt
tcccaactgaaaccgtttattccgcagcaggtggcgggcaaagattggcaggatcacgat
accgatctgatcgccaacgacgcgcgcttcttcaccttcgtgccgggggaaacgtggcac
ggctttgaaggctatgcccaggatcagtatttggtcgatccgtgcaagctgctgctgact
acgccgggtattgacgccacgaccggccaatacaccgcgttcggcgtgccggccaccatt
ctggccaacttcctgcgcgagaacggcatcgtgccggagaagtgcgatctcaactcgatc
ctgttcctgctgaccccggcggagaacccggccaagatggagcagctggtggatatgctg
gcgcagttcgaacgctatgttgaagaagatgcgccgctgagcgtggtgctgccgacggtg
taccgcaagaacgagcaacgttatcgtggctacagcattcgtcggctgtgtcaggagatg
cacgatctgtacgtcagctttgacgtcaaacagctgcaaaaagagatgttccgtcaggat
catttcccgccggtggtgatgaacccgcaggacgccaacgtggagtttatccgcgacaac
gtcgagctggtgccgatcggccaggctgcagggcgcatcgcggcggaaggggccttgccg
tatccgccgggcgtgctgtgcgtggtgccgggtgaagtgtggggcggggcggtgcagcgc
tacttcctggcgctggaggagggcatcaaccgcctgccgggcttctcgccggagctgcag
ggggtctacatcgagaagaaagatcacggctggaagcgcatcttcggttatatgatcaag
cagtaa
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