Serratia surfactantfaciens: ATE40_017890
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Entry
ATE40_017890 CDS
T06779
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur00250
Alanine, aspartate and glutamate metabolism
ssur00310
Lysine degradation
ssur00350
Tyrosine metabolism
ssur00650
Butanoate metabolism
ssur00760
Nicotinate and nicotinamide metabolism
ssur01100
Metabolic pathways
ssur01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ATE40_017890 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ATE40_017890 (gabD)
00310 Lysine degradation
ATE40_017890 (gabD)
00350 Tyrosine metabolism
ATE40_017890 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ATE40_017890 (gabD)
Enzymes [BR:
ssur01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ATE40_017890 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ATE40_017890 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ATE40_017890 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AOF01021
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Position
complement(3816457..3817911)
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AA seq
484 aa
AA seq
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MKLNNPELLRSQCLINGEWCDALSGKREAVINPATGAELASIPLVSEEETQQAIAAAQRA
QNDWKQLTAKQRSALLLAWADKVLAAQEDLAQLMTAEQGKSLAEARGEVAYAASFITWFA
EEAKRVDGAVLQAPQASQRLVVVKQPIGVCAAITPWNFPAAMITRKVAPALAAGCAIIVK
PAEQTPLTALALAKLAQDAGIPAGVLQVVTGEAAQVGKVLCDSPVVRKLSFTGSTEVGRI
LMAQCAPSIKKLSLELGGNAPVIVFDDANLDAAVAGIMASKFRNSGQTCVCANRIYVQDG
IYERLAEKLVAAVEQLKVGDGSHEGTTQGPLIDSDAVAKVQSHIDDALIKGAQIATGGQP
HALGGTFFQPTVVTGVTQKMRFAKEETFGPVAPLFRFHDEAEAIAMANDTEFGLAAYLFT
QNAARQWRVPEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSRYGIDEYLELKYLCI
DVSC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaacaatcccgagctgttgcgcagccagtgtctgatcaatggcgaatggtgc
gacgccctgagcggcaagcgcgaagcggtgatcaacccggccaccggcgccgagctggcc
agcattccgctggtcagcgaagaggaaacccagcaggcgatcgcagcggcgcagcgggcg
caaaacgactggaaacagctgaccgccaagcagcgttccgcgctgctgctggcttgggcc
gataaggtgttggccgcgcaggaggatctggcgcagctgatgaccgccgagcagggcaaa
tcgctggcggaagcgcgcggggaagtggcctacgccgcatcgttcatcacctggttcgcc
gaagaggccaagcgggtagacggcgcggtattgcaggcgccgcaggcttcgcagcgcctg
gtggtggtgaagcagccgatcggcgtgtgcgcggccatcaccccgtggaacttcccggcg
gcgatgatcacccgcaaggtggcgccggcgctggcggcgggctgcgccatcatcgtcaaa
ccggccgagcaaacgccgctgaccgcgctggcgctggccaagctggcgcaggatgccggc
attcccgccggtgtgttgcaggtggtgaccggcgaagcggcgcaggtgggcaaggtgctg
tgcgacagcccggtggtgcgcaagctgagctttaccggttcgaccgaggtcggccgcatc
ctgatggcgcagtgcgcgccgagcatcaagaaactgtcgttggagctgggcggcaacgcg
ccggtcatcgtgttcgacgacgccaatctggacgcggcggtagcgggcatcatggcctcc
aagttccgcaacagcggccagacctgcgtgtgcgccaaccgcatctacgtgcaggatggc
atctacgagcggctggcggagaagctggtggcggcggtcgagcagttgaaagtcggcgac
ggcagccacgaaggcaccacccagggaccgctgatcgacagcgatgcggtggcgaaggtg
cagagccacatcgatgacgcgctgatcaaaggggcgcagatcgccaccggcggccagccg
cacgcgctgggcggcaccttcttccagccgacggtggtgaccggcgtgacgcagaagatg
cgcttcgccaaagaggagaccttcgggccggtggcgccgctgttccgtttccatgacgag
gcggaagccatcgccatggccaacgacaccgaattcggcctggccgcctacctgttcacg
cagaacgcggcgcgccagtggcgcgtgccggaagcgctggagtacggcatggtcggcatc
aacaccgggctgatttccaatgaagtggcgccgttcggcggcgtgaaacagtcagggctc
gggcgtgaaggatcgcgctacgggatagatgaatatctggagctgaaatacctgtgtatc
gatgtgagctgttga
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