Serratia surfactantfaciens: ATE40_021125
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Entry
ATE40_021125 CDS
T06779
Name
(GenBank) selenocysteinyl-tRNA-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssur03012
]
ATE40_021125
Translation factors [BR:
ssur03012
]
Eukaryotic type
Elongation factors
ATE40_021125
Prokaryotic type
ATE40_021125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
AOF01628
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Position
4517085..4518941
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AA seq
618 aa
AA seq
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MIIATAGHVDHGKTTLLQAISGINADRLPEEKRRGMTIDLGYAYWPQPDGRVLGFIDVPG
HEKFLANMLAGVGGIDHALLVVACDDGVMAQTREHLAILRLSGHPALTVALTKADRVDAA
RVDEVRSQVRDELARQGWPDAPLFVTAAAAGEGIEALRTHLLALSPAEHALTRRFRLAVD
RAFSVKGAGLVVTGTALGGRVKVGDTLWLTGADAPVRVRGLHAQNQTVEQAQAGQRIALN
ISGDVDKERIARGDWLLAQRPPEAAERILVALETDRPIRHWQPLHLHHAASHITGRISLL
NDELAELILDRPLWLAQNDRLVLRDIGARQTLGAARVLRLNAPKRGKRQPDYLARLQALA
QAQDDAQALALELPHGALSLAAFAWARQLTDDGLNDLLANGDLLIVGDRALAQDQVQQAE
SRLLQVLTEYHQQHADQLGLGRARLRRMALPQQPEALVFMMIDRLLKAGALRNTRGWLHL
PEHGLAFSAEEAPLWARIEPLFGDEPWWVRDLALELGEEESRVRTLLRKAAQLGHVTAVV
VDRYYLSRRIEQFAALIRALDAERGGANAADFRDRLGVGRKLAIQVLEFFDRSGFTRRKG
NEHLLRDGGLFGSESPTR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgccactgccggccatgtcgatcatggcaaaaccaccttgctgcaggcgatc
tccgggatcaacgcggatcgcctgccggaagaaaagcgccgtggcatgaccatcgatctg
ggctacgcctattggccgcagccggacggccgggtgctggggtttatcgacgtgcccggc
cacgagaaattcctcgccaatatgctggcgggcgtcggtggcatcgaccatgcgttgctg
gtggtggcctgcgacgatggcgtgatggcgcagacccgcgagcatctggcgatcctgcgc
ctgagcgggcacccggcgttgacggtggcgctgaccaaggccgaccgggtggacgcggcg
cgtgtcgatgaagtgcgtagccaggtgcgcgacgagctggcgcgccaagggtggcccgat
gcgccgctgttcgtgaccgcggcggcggcgggcgagggcatcgaggcgctgcgcacgcat
ttgctggcgttgtcgcccgctgaacatgcgctgacgcgccgttttcgcctggcggtagac
cgtgcgttcagcgtcaaaggggcggggctggtggtgaccggcaccgcgctcggcggccgg
gtgaaggtgggggatacgctgtggctgaccggtgctgacgcgccggtgcgggtgcgtggc
ctgcatgcccagaatcagaccgtggagcaggcgcaggccgggcagcgcattgcgcttaac
atcagcggcgatgtcgacaaagagcggatcgcgcgcggcgattggctgctggcgcagcgt
ccgcccgaagcggcggaacgcattctggtggcgttggagacggatcggccgatccgccat
tggcagccgctgcatctgcaccatgccgccagccacatcaccgggcgcatttcgttgctg
aacgacgagctggcggaactgatcctcgatcgcccgctgtggttggcgcagaacgatcgg
ctggtgctgcgcgatatcggcgcgcggcaaacgctgggcgcggcccgggtgctcaggctg
aatgcgcccaagcgcggcaaacgtcagccggactatctggcacggctgcaggccctggcg
caggcgcaagacgatgcgcaggcgctggcgcttgagttgccgcacggcgcgctgtcgctg
gcggcgttcgcctgggcgcggcaattgacggacgatggtctgaacgatctgctggcgaac
ggcgatctgctgatcgtcggtgaccgggcgctggcgcaagatcaggtgcaacaggcggaa
agccgcctgctgcaggtgctgacggaatatcaccaacagcacgccgatcagctgggctta
gggcgcgcccgcctgcggcgcatggcgctgccgcagcagcctgaagcgctggtgtttatg
atgatcgatcggctgctgaaggccggtgcgctgcgcaatacgcgcggctggctgcacctg
ccggagcacggcctggcgttcagcgccgaagaggcgccgctgtgggcgcgtatcgaaccg
ctgttcggcgacgaaccctggtgggtgcgcgatctggcgctcgaattgggcgaggaggag
agccgggtgcgaacgctgctgcgcaaggcggctcaactgggccatgtgacggcggtggtg
gtggatcgctattacctcagccgacgcatcgagcagtttgcggcgctgatccgcgcgctg
gatgcggagcggggtggcgccaacgccgccgacttccgcgatcggcttggcgtcgggcgc
aagctggcgatccaggtgctggagttcttcgatcgcagcggctttacccgccgcaagggc
aacgagcatctgctgcgcgacggcgggctgttcggtagcgagtcccctacccgataa
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