Serratia surfactantfaciens: ATE40_021485
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Entry
ATE40_021485 CDS
T06779
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ssur
Serratia surfactantfaciens
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ATE40_021485
Enzymes [BR:
ssur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ATE40_021485
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AOF01694
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Position
4602358..4604364
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AA seq
668 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPEAKKVLNTLLPVGILSRADIVLPNEFQALHANFPPERPVPTLIARLFELPIQI
SVPLYSLERVPANQQPLAYLVLQADSFRMYQFILSILSTMLSTYLLLALILSVAITWCMN
RLMVHPLRAMAKELENISQDEAPYHQLMLPALHQDDELGLLVRNYNRNQQTLAKAHADMS
RLSTRHPVTELPNAVLLNALLEQHIASSLRPERFNLLVIGIETLHEASGVMSPAMREALL
LALAKKLRGCIDENGVLAQLSNTEFAILAKGIERPFHAMQLARRIMAEINAPLTLEGLAL
RPNASIGIAHYLNQEESAEQLLRSATSAMMSAHREGKNQILFFEPSLTERTQKRLTQESE
ILHGIEQRHFTLFLQPQIDMQSNEVIGAEALLRWQQYDGSYTLPADVIPLAEELGVIVPL
GNWVLEESCRILADWQQRGIALPLAVNVSGIQMQDEAFVPHLKSLLAQYRIDPRKLLLEI
TETVRIDDLDRALALLRELHDLGLSIALDDFGMGYSSLEYLNRLKSLPIDLIKIDRSFIQ
GLPADDAMVRIVSSISEVLALPVMAEGVENAEQRDWLLRHGIRSGQGFLFARPLPREAFE
AEFCRAAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcgttaacgattaagcagatggcgacggtgtccggcgtggcgctg
gttacgatctgcatttttatcgtgatccagttattccactttgtgcagcagcgcagggat
gactacgcccagcaactggagaatatcgcccactccgtgcgccagccactggcggaagcg
gtgctgcgcatggacgtgccggaagccaaaaaggtgctgaacacgctgttgccggtcggc
attctgagccgggcggatatcgtcttgccgaatgagtttcaggcgctgcatgccaatttt
ccgccggagcggccggtgccgacgctgatcgcccggctgtttgaattgcctatccaaatt
tccgtgccgctttattcgctggagcgggtgccggccaaccagcagccgctggcttatctg
gtgctgcaggccgattcgttccgcatgtaccagtttatcctcagtattttgtcgaccatg
ctgtcgacgtacctgctgctggcgctgatcctgtcggtggccatcacctggtgcatgaac
cggctgatggtgcatccactgcgcgcgatggccaaagagctggaaaacatctcgcaggac
gaagcgccttatcaccagctgatgctgccggcgctgcatcaggacgacgagctcggcctg
ctggtgcgcaactacaaccgcaatcaacagacgctggccaaggcgcatgccgacatgagc
cgcctcagcacccgtcacccggtgaccgaactgccgaatgcggtactcttgaacgcgctg
ctggaacagcatatcgcctccagcctgcgccctgagcgttttaatctgctggtgatcggc
atcgagacgttgcatgaggcctccggcgtgatgagcccggcgatgcgtgaagccctgctg
ttggcgctggcgaagaaactgcgcggctgcatcgacgaaaacggcgtgctggcgcagctg
agcaataccgaattcgccatcctggccaagggcatcgagcggccgttccacgccatgcag
ctggcgcggcgcatcatggcggagatcaacgcgccgttgacgctggaaggcctggcgctg
cggcctaacgccagcatcggcatcgcgcactacctcaatcaggaggagagcgcggaacag
ctgctgcgcagcgctacctcggcgatgatgtccgcgcaccgcgaaggaaaaaatcagatt
ctgttcttcgaacccagcctgacggaacgcacgcagaagcggctgacgcaggagagcgag
atcctgcacggcattgaacagcggcatttcacgctgttcctgcagccgcagatcgatatg
cagtccaatgaggtgatcggcgccgaagcgctgttgcgttggcaacagtacgacggcagc
tataccctgccggccgacgtcatcccgcttgcggaagagctgggcgtgatcgtgcccctc
ggcaactgggtgctggaagagtcttgccgtatcctggcggactggcagcagcgcggtatt
gcgctgccgctggcggtcaacgtttccggcattcagatgcaggacgaggcgttcgttccg
catctgaaaagtctgctggcacagtatcggatcgatccgcgcaagctgctgctggagatc
accgagacggtacgcatcgacgatctcgaccgcgcgctggcgctgctgcgcgagctgcac
gatctggggctgtcgatcgcgctggacgacttcggcatgggctactccagcctggagtac
ctgaaccggttgaaatccctgccgatcgatttgattaaaatcgaccgcagcttcattcag
gggctgccggccgacgatgcgatggtgcgcatcgtcagttcgatctccgaagtgctggcg
ctgccggtgatggccgaaggcgtggaaaacgccgagcagcgcgactggctgctgcggcac
ggcattcgcagcgggcaagggttcctgttcgcccggccgctgccgcgcgaagccttcgaa
gccgagttttgccgcgcggcgccttga
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