Serratia surfactantfaciens: ATE40_021675
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Entry
ATE40_021675 CDS
T06779
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur03420
Nucleotide excision repair
ssur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATE40_021675
03430 Mismatch repair
ATE40_021675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssur03400
]
ATE40_021675
Enzymes [BR:
ssur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATE40_021675
DNA repair and recombination proteins [BR:
ssur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATE40_021675
MMR (mismatch excision repair)
Other MMR factors
ATE40_021675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
AOF01726
LinkDB
All DBs
Position
4642388..4644550
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNSIQYAWIRLLAGGN
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISIYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccgatctgctcgatagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggggcgggcagcggcaagacgcgggtgctggtg
catcgcatcgcctggctgctgtcggtggagaactgctcgccgtattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccatcgtatcgaacatctgatcggtacc
agccagggcggcatgtggatcggcaccttccacggcctggcgcatcgcctgctgcgcgcc
caccatctggaggccaacctgccgcaggatttccagatcctcgacagcgatgaccagctg
cggctgctcaagcgcatcatcaaggcgctgaacgtcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgaaggcctgcggccgcagcacgtcgag
acctacaacaacccggtggaggccacctggttgcgcatctaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgagctgctgctgcgcgcgcatgaactgtgg
ctgaacaagccgcatatcctcaatcattaccgcgaacgtttcaccaacatactggtggac
gaattccaggataccaacagcatccagtacgcctggatccgcctgctggcgggcggcaac
agcaacgtgatgatcgtcggcgacgacgaccagtcaatctacggctggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaggatttccccggcgcggaaaccatccgcctggag
cagaactaccgttccaccagcaacatcctgaaagcggccaataccctgatcgccaacaac
gacgggcgcatgggtaaaaacctgtggaccgaaggcggcgaaggcgaaccaatttccatc
tactgcgccttcaacgagctcgacgaagcgcgctttgtggtcaatcgcatcaagacctgg
caagacaacggcggcgcgttgaacgactgcgccatcttgtaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagacggcgatgccgtaccgcatctacggcggccag
cgtttcttcgaacgccaggaaatcaaggacgcgctggcttacctgcgtcttatctccaac
cgcaacgatgatgcggcctttgagcgcgtggtcaacaccccgacgcggggcatcggcgat
cgcactctcgacgtggtgcgccaggcggcgcgcgatcgccagctgacgctgtggcaggcg
acacgcgagctgatgcaggacaaggtgttggccggccgcgccgcgtccgcgctgcagcgt
tttatcgaactggtggagtcgctggcgcatgaaaccgctgacatgccgctgcatgtgcag
accgaccgggtgatccgcgattccgggctgttcatcatgtatgagcaggaaaagggtgaa
aaggggcaggcgcgcatcgaaaaccttgaggaactggtgacggcgacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgctgcaggcgttcctgtcgcatgcggcgctg
gaggcgggtgaaggccaggccgacgcctatcaggacgcggtgcaactgatgaccctgcac
tccgccaaggggctggagttcccgctggtgtttatcgtcggcatggaagaaggcatgttc
ccgagccagatgtcgctggatgaaggcggccggttggaagaggagcgccgcctggcctat
gtgggcgtaacgcgcgccatgcagaagctgacgctgacctatgccgaaacgcgccgtttg
tacggcaaagaggtgtatcaccggccgtcgcgctttatcggcgagctgccggaagagtgc
gtggaagaagtgcgcctgcgcgccagcgtatcccgcccggtcaatcaccgccgcatgggc
acgccgatcagcgagaacgacaccggctacaagctgggccagcgcgtgcgccatcccaag
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccggctgcagatc
gctttcccgggcgagggcatcaagtggctggtggcggcctacgctcgcctggaaacggta
taa
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