Serratia surfactantfaciens: ATE40_022415
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Entry
ATE40_022415 CDS
T06779
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssur
Serratia surfactantfaciens
Pathway
ssur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATE40_022415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssur03019
]
ATE40_022415
03110 Chaperones and folding catalysts [BR:
ssur03110
]
ATE40_022415
03029 Mitochondrial biogenesis [BR:
ssur03029
]
ATE40_022415
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssur04147
]
ATE40_022415
Enzymes [BR:
ssur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ATE40_022415
Messenger RNA biogenesis [BR:
ssur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ATE40_022415
Chaperones and folding catalysts [BR:
ssur03110
]
Heat shock proteins
HSP60 / Chaperonin
ATE40_022415
Mitochondrial biogenesis [BR:
ssur03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ATE40_022415
Exosome [BR:
ssur04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ATE40_022415
Exosomal proteins of other body fluids (saliva and urine)
ATE40_022415
Exosomal proteins of breast cancer cells
ATE40_022415
Exosomal proteins of colorectal cancer cells
ATE40_022415
Exosomal proteins of bladder cancer cells
ATE40_022415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2712
Motif
Other DBs
NCBI-ProteinID:
AOF01860
LinkDB
All DBs
Position
4811603..4813249
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVAGKIAALKGDNEDQNVGIKVALRAMEAPLRQIVVNAGEEASVIANQVKAGEGSYGYNA
YSEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKADAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaatgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgcaacgtagtgctg
gataaatctttcggcgcaccaaccatcaccaaagatggcgtttccgttgcgcgtgaaatc
gaactggaagacaagttcgagaacatgggcgctcagatggtgaaagaagtggcctccaaa
gcgaacgacgcggcgggcgacggcaccaccactgcaaccgtactggctcaatccatcatc
accgaaggtctgaaagcggttgctgcaggcatgaacccgatggatctgaagcgcggcatc
gacaaagcggttgtcgctgcggttgaagaactgaaaaaactgtccgtaccttgctccgat
tccaaagctatcgctcaggtaggcaccatctccgccaactccgacgaaaccgtgggtaaa
ctgatcgcggaagcgatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaagacgagctggacgtggttgaaggtatgcagttcgaccgcggttacctg
tccccatacttcatcaacaagccggaaaccggttctgttgagctggaaagcccgttcatc
ctgctggctgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagacgttgaaggcgaagcgctggcg
accctggtggtcaacaccatgcgcggcatcgtgaaagtcgccgccgttaaggcgcctggc
ttcggcgaccgtcgtaaagccatgctgcaggacatcgctaccctgactgccggtaccgtt
atctctgaagagatcggtctggagctggaaaaagccaccctggaagatctgggccaggcg
aagcgcgttgtcatcaacaaagacaccaccatcatcatcgatggcgtgggcgacgaagcg
accatccagggccgcgttgctcagatccgtcagcagatcgaagaagcgacctctgactac
gatcgtgaaaaactgcaggagcgcgtagcgaaactggccggcggcgttgccgttatcaag
gttggcgcagccactgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcgacccgcgccgcagtggaagaaggcgtggttgcaggcggcggcgtagcgctgatc
cgcgttgcaggcaaaatcgccgcgctgaaaggcgacaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagcccctctgcgtcagatcgtggtcaacgccggtgaa
gaagcttccgttatcgccaaccaggtgaaagcgggcgaaggcagctacggctacaacgct
tactctgaagaatacggcgacatgatcgcgatgggcatcctggatccaaccaaagtcacc
cgttctgctctgcagtacgcggcgtccgtggctggcctgatgatcaccaccgaatgcatg
gtcaccgacctgccgaaggctgacgcaccggatctgggcgcagcaggcggtatgggcggc
atgggcggcatgggcggcatgatgtaa
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